RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RPGRIP1Q96KN7 1286 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 FOXP1Q9H334 677 aaPredicted RBP21■□□□□ 0.95
SFSWAP-207ENST00000538548 CEP126Q9P2H0 1117 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 FMNL1O95466 1100 aaPredicted RBP21■□□□□ 0.95
SFSWAP-207ENST00000538548 TRIM14Q14142 442 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 SART3Q15020 963 aaKnown RBP21■□□□□ 0.95
SFSWAP-207ENST00000538548 CCDC91Q7Z6B0 441 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 TEX2Q8IWB9 1127 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 NKX2-3Q8TAU0 364 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 FAM76AQ8TAV0 307 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 CRACR2AQ9BSW2 395 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 CEP131Q9UPN4 1083 aa21■□□□□ 0.95
SFSWAP-207ENST00000538548 MYO5AQ9Y4I1 1855 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 UBE2Q2LH0YL09 131 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 GGCXP38435 758 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 NFXL1Q6ZNB6 911 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 SLF1Q9BQI6 1058 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 IGDCC4Q8TDY8 1250 aa20.99■□□□□ 0.95
SFSWAP-207ENST00000538548 EBAG9O00559 213 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 USP49Q70CQ1 688 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 RIN2Q8WYP3 895 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 LY9Q9HBG7 655 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 TBC1D2BQ9UPU7 963 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 PCDHB6Q9Y5E3 794 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 TTC5Q8N0Z6 440 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 XAGE2Q96GT9 111 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 GSDMAQ96QA5 445 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 NUP88Q99567 741 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 RNF216Q9NWF9 866 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 MYH7P12883 1935 aa20.98■□□□□ 0.95
SFSWAP-207ENST00000538548 LRRC10BA6NIK2 292 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 B4E1Z4 1266 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 E2F4Q16254 413 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 MMS19Q96T76 1030 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 PUS3Q9BZE2 481 aaKnown RBP20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 KAT14Q9H8E8 782 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 SAR1BQ9Y6B6 198 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 PPP1R3GB7ZBB8 358 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 N4BP3O15049 544 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 IFNAR1P17181 557 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 ADORA1P30542 326 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 ZAP70P43403 619 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 SH3RF1Q7Z6J0 888 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 MYL10Q9BUA6 226 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 HAUS4Q9H6D7 363 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 STRN4Q9NRL3 753 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 LIMA1Q9UHB6 759 aaKnown RBP20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 GUCA1BQ9UMX6 200 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 FAM169AQ9Y6X4 670 aa20.97■□□□□ 0.95
SFSWAP-207ENST00000538548 GOLGA6CA6NDK9 693 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 GOLGA6DP0CG33 693 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 CHRM1P11229 460 aaPredicted RBP20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 CCT6AP40227 531 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 CCT5P48643 541 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 IRAK1P51617 712 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 SCARF1Q14162 830 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 KRT31Q15323 416 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 GOLGA6AQ9NYA3 693 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 EPN1Q9Y6I3 576 aaPredicted RBP20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 AGPSO00116 658 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 NDUFA10O95299 355 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 LIFRP42702 1097 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 CKAP4Q07065 602 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 SKIDA1Q1XH10 827 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 TMEM67Q5HYA8 995 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 PAPD7Q5XG87 772 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 BRINP3Q76B58 766 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 KAT2BQ92831 832 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.96■□□□□ 0.955e-11■□□□□ 9.7
SFSWAP-207ENST00000538548 KCNJ14Q9UNX9 436 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 SLC12A7Q9Y666 1083 aa20.96■□□□□ 0.95
SFSWAP-207ENST00000538548 RNF225M0QZC1 329 aaPredicted RBP20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 KRT9P35527 623 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 AFMP43652 599 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 LIG3P49916 1009 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 GSCP56915 257 aaPredicted RBP20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 PAGE5Q96GU1 130 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 SELENOOQ9BVL4 669 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 AATFQ9NY61 560 aaKnown RBP eCLIP20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 REXO2Q9Y3B8 237 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 SPAG1Q07617 926 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 PPFIA1Q13136 1202 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 HDAC6Q9UBN7 1215 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 PARP4Q9UKK3 1724 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 LAMB4A4D0S4 1761 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 BCL9LQ86UU0 1499 aa20.95■□□□□ 0.94
SFSWAP-207ENST00000538548 STRCQ7RTU9 1775 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 ENC1O14682 589 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 GUCY1A2P33402 732 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 USP8P40818 1118 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 DPYDQ12882 1025 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 PAXIP1Q6ZW49 1069 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 TRIM22Q8IYM9 498 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 KIF1AQ12756 1690 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms