RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.21
ACTN1-205ENST00000538545 BRAPQ7Z569 592 aa16.33■□□□□ 0.21
ACTN1-205ENST00000538545 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.21
ACTN1-205ENST00000538545 C7orf43Q8WVR3 580 aa16.33■□□□□ 0.21
ACTN1-205ENST00000538545 CABP5Q9NP86 173 aa16.33■□□□□ 0.21
ACTN1-205ENST00000538545 USP25Q9UHP3 1055 aa16.33■□□□□ 0.21
ACTN1-205ENST00000538545 CNTNAP5Q8WYK1 1306 aa16.33■□□□□ 0.2
ACTN1-205ENST00000538545 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
ACTN1-205ENST00000538545 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.21e-13■■■□□ 15
ACTN1-205ENST00000538545 BAG6P46379 1132 aa16.33■□□□□ 0.2
ACTN1-205ENST00000538545 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-205ENST00000538545 PPP1R1BQ9UD71 204 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-205ENST00000538545 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-205ENST00000538545 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
ACTN1-205ENST00000538545 NID2Q14112 1375 aa16.33■□□□□ 0.2
ACTN1-205ENST00000538545 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 MTA3Q9BTC8 594 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 YDJCA8MPS7 323 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 PCP11498 1178 aaKnown RBP16.32■□□□□ 0.2
ACTN1-205ENST00000538545 STYK1Q6J9G0 422 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 NOSTRINQ8IVI9 506 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 CEP95Q96GE4 821 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 DPEP1P16444 411 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 CRKP46108 304 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 TYRO3Q06418 890 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 AXDND1Q5T1B0 1012 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-205ENST00000538545 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
ACTN1-205ENST00000538545 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-205ENST00000538545 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 AP5Z1O43299 807 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 PPIP5K2O43314 1243 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 PTPAQ15257 358 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 USP17L2Q6R6M4 530 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 C16orf86Q6ZW13 317 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-205ENST00000538545 CYTH3O43739 400 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 CCDC73Q6ZRK6 1079 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 LUZP1Q86V48 1076 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 CNKSR1Q969H4 720 aa16.31■□□□□ 0.2
ACTN1-205ENST00000538545 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-205ENST00000538545 AKR1B1P15121 316 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
ACTN1-205ENST00000538545 ANO6Q4KMQ2 910 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 ADALQ6DHV7 355 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 PODNQ7Z5L7 613 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 TEKT1Q969V4 418 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 DNAJC25Q9H1X3 360 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 DDX19AQ9NUU7 478 aaKnown RBP16.3■□□□□ 0.2
ACTN1-205ENST00000538545 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
ACTN1-205ENST00000538545 ZBTB22O15209 634 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 RAD17O75943 681 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 DDAH1O94760 285 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 PLCG2P16885 1265 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 TYW1BQ6NUM6 668 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 SLF2Q8IX21 1173 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 LRRC47Q8N1G4 583 aaKnown RBP16.3■□□□□ 0.2
ACTN1-205ENST00000538545 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
ACTN1-205ENST00000538545 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
ACTN1-205ENST00000538545 PRPF3O43395 683 aaKnown RBP16.29■□□□□ 0.2
ACTN1-205ENST00000538545 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
ACTN1-205ENST00000538545 NPY5RQ15761 445 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 WASF1Q92558 559 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-205ENST00000538545 YEATS4O95619 227 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 KCNA3P22001 575 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 SHC4Q6S5L8 630 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-205ENST00000538545 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 ANP32BQ92688 251 aaKnown RBP16.29■□□□□ 0.2
ACTN1-205ENST00000538545 UBA5Q9GZZ9 404 aa16.29■□□□□ 0.2
ACTN1-205ENST00000538545 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 TDRD3Q9H7E2 651 aaKnown RBP16.28■□□□□ 0.2
ACTN1-205ENST00000538545 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
ACTN1-205ENST00000538545 FRMPD2Q68DX3 1309 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-205ENST00000538545 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-205ENST00000538545 PFKFB1P16118 471 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 PHF20Q9BVI0 1012 aa16.28■□□□□ 0.2
ACTN1-205ENST00000538545 BIN1O00499 593 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 KINO60870 393 aaKnown RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 LETM1O95202 739 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-205ENST00000538545 CALM1P0DP23 149 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 CALM2P0DP24 149 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 CALM3P0DP25 149 aa16.27■□□□□ 0.2
ACTN1-205ENST00000538545 ATL3Q6DD88 541 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms