RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 ZNF296Q8WUU4 475 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-207ENST00000538375 ZCCHC17Q9NP64 241 aaKnown RBP15.71■□□□□ 0.11
COPS7A-207ENST00000538375 CASP8AP2Q9UKL3 1982 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 FOXP2O15409 715 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 CYP2C8P10632 490 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 CHMLP26374 656 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 ALX1Q15699 326 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 TREML2Q5T2D2 321 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 ACER1Q8TDN7 264 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 CFHR5Q9BXR6 569 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 TOMM22Q9NS69 142 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 AGTPBP1Q9UPW5 1226 aa15.7■□□□□ 0.1
COPS7A-207ENST00000538375 DDX60LQ5H9U9 1706 aaKnown RBP15.69■□□□□ 0.1
COPS7A-207ENST00000538375 ATAD5Q96QE3 1844 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 ECM2O94769 699 aaPredicted RBP15.69■□□□□ 0.1
COPS7A-207ENST00000538375 RASA1P20936 1047 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 OSBPP22059 807 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 HAND2P61296 217 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 PABPC4Q13310 644 aaKnown RBP eCLIP15.69■□□□□ 0.1
COPS7A-207ENST00000538375 SH3D19Q5HYK7 790 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 CLEC10AQ8IUN9 316 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 PROCA1Q8NCQ7 364 aaPredicted RBP15.69■□□□□ 0.1
COPS7A-207ENST00000538375 PARK7Q99497 189 aaKnown RBP15.69■□□□□ 0.1
COPS7A-207ENST00000538375 INCENPQ9NQS7 918 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
COPS7A-207ENST00000538375 RAD21O60216 631 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 TLR2O60603 784 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 USP14P54578 494 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 SP3Q02447 781 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 ICA1Q05084 483 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 RRP12Q5JTH9 1297 aaKnown RBP15.68■□□□□ 0.1
COPS7A-207ENST00000538375 SMCR8Q8TEV9 937 aaPredicted RBP15.68■□□□□ 0.1
COPS7A-207ENST00000538375 KANSL2Q9H9L4 492 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 ARHGEF10LQ9HCE6 1279 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
COPS7A-207ENST00000538375 ZNF213O14771 459 aa15.67■□□□□ 0.1
COPS7A-207ENST00000538375 RANBP6O60518 1105 aaKnown RBP15.67■□□□□ 0.1
COPS7A-207ENST00000538375 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
COPS7A-207ENST00000538375 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
COPS7A-207ENST00000538375 EEF2P13639 858 aaKnown RBP15.67■□□□□ 0.1
COPS7A-207ENST00000538375 TFAP4Q01664 338 aa15.67■□□□□ 0.1
COPS7A-207ENST00000538375 KIAA1683Q9H0B3 1180 aa15.67■□□□□ 0.1
COPS7A-207ENST00000538375 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
COPS7A-207ENST00000538375 ROBO3Q96MS0 1386 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 IRX3P78415 501 aaPredicted RBP15.66■□□□□ 0.1
COPS7A-207ENST00000538375 NOM1Q5C9Z4 860 aaKnown RBP15.66■□□□□ 0.1
COPS7A-207ENST00000538375 ERO1AQ96HE7 468 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 SH2D4AQ9H788 454 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 CTNNA3Q9UI47 895 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 ANAPC4Q9UJX5 808 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 SLC45A1Q9Y2W3 748 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 PHIPQ8WWQ0 1821 aa15.66■□□□□ 0.1
COPS7A-207ENST00000538375 TSPY2A6NKD2 308 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 KIF22Q14807 665 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 BMP2KLQ5H9B9 411 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 MFSD6Q6ZSS7 791 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 KIAA1211Q6ZU35 1233 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 SIAH1Q8IUQ4 282 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 CD99L2Q8TCZ2 262 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 DSCC1Q9BVC3 393 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-207ENST00000538375 IL25Q9H293 177 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
COPS7A-207ENST00000538375 USP17L15C9J2P7 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L13C9JLJ4 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L11C9JVI0 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L18D6R9N7 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L22D6RA61 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L17D6RBQ6 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L19D6RCP7 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L20D6RJB6 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 USP17L24Q0WX57 530 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 IMMTQ16891 758 aaKnown RBP15.64■□□□□ 0.09
COPS7A-207ENST00000538375 C17orf99Q6UX52 265 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 CTU1Q7Z7A3 348 aaKnown RBP15.64■□□□□ 0.09
COPS7A-207ENST00000538375 SPICE1Q8N0Z3 855 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
COPS7A-207ENST00000538375 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.64■□□□□ 0.09
COPS7A-207ENST00000538375 TMX2Q9Y320 296 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 TRIM17Q9Y577 477 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 RAD50Q92878 1312 aa15.64■□□□□ 0.09
COPS7A-207ENST00000538375 LAMB1P07942 1786 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 SGSM2O43147 1006 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 HOXA7P31268 230 aaPredicted RBP15.63■□□□□ 0.09
COPS7A-207ENST00000538375 ARHGEF6Q15052 776 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 AKNAD1Q5T1N1 836 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
COPS7A-207ENST00000538375 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 ANKRD13CQ8N6S4 541 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 NEDD1Q8NHV4 660 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 TANGO6Q9C0B7 1094 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 RNF41Q9H4P4 317 aaPredicted RBP15.63■□□□□ 0.09
COPS7A-207ENST00000538375 RPAP3Q9H6T3 665 aaPredicted RBP15.63■□□□□ 0.09
COPS7A-207ENST00000538375 GOPCQ9HD26 462 aa15.63■□□□□ 0.09
COPS7A-207ENST00000538375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
COPS7A-207ENST00000538375 MYH8P13535 1937 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms