RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PRKG1Q13976 671 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SMC3Q9UQE7 1217 aa12.47□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ATRNL1Q5VV63 1379 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 GDF11O95390 407 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 AKR1B1P15121 316 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 SHMT1P34896 483 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 LIFRP42702 1097 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 NBPF12Q5TAG4 269 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 PRAMEF18Q5VWM3 479 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 DGKHQ86XP1 1220 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 NECAB1Q8N987 351 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CTCFLQ8NI51 663 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 IGDCC4Q8TDY8 1250 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 CLIP2Q9UDT6 1046 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
TNFRSF1A-211ENST00000538363 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CCDC196A0A1B0GTZ2 297 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TBC1D12O60347 775 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 NMT2O60551 498 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CDKL5O76039 1030 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 AKAP17AQ02040 695 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GABPAQ06546 454 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CCDC144CPQ8IYA2 1237 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ZNF408Q9H9D4 720 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 KANSL2Q9H9L4 492 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 LY9Q9HBG7 655 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TCP11L1Q9NUJ3 509 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 KIF3AQ9Y496 699 aa12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 POLR2AP24928 1970 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ADM5C9JUS6 153 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TTLL1O95922 423 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GH2P01242 217 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TOP1P11387 765 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PDIA3P30101 505 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 KIF5BP33176 963 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ME3Q16798 604 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 RTN1Q16799 776 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TATDN1Q6P1N9 297 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ZNF654Q8IZM8 581 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 FEZ1Q99689 392 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 DDX60LQ5H9U9 1706 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PFKFB2O60825 505 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ASNSP08243 561 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 RXRAP19793 462 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ICA1Q05084 483 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SEPT2Q15019 361 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 FBXL16Q8N461 479 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PNMA1Q8ND90 353 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 MYL10Q9BUA6 226 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CWC22Q9HCG8 908 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 BRPF3Q9ULD4 1205 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CSADQ9Y600 493 aa12.43□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CTNND1O60716 968 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 DDAH1O94760 285 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CAP2P40123 477 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 GNAQP50148 359 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 COL9A3Q14050 684 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 PPP2R5BQ15173 497 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SEC23AQ15436 765 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CCDC96Q2M329 555 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 MAP1SQ66K74 1059 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 APOA5Q6Q788 366 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 SGMS1Q86VZ5 419 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 FANCBQ8NB91 859 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
TNFRSF1A-211ENST00000538363 TEPSINQ96N21 525 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms