RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 MKNK2Q9HBH9 465 aa13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 ABT1Q9ULW3 272 aaKnown RBP13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
AC087235.1-201ENST00000538297 DDX60LQ5H9U9 1706 aaKnown RBP13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 ZBTB48P10074 688 aaPredicted RBP13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 ECE1P42892 770 aa13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 CDK8P49336 464 aa13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 MFRPQ9BY79 579 aa13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 LSG1Q9H089 658 aaKnown RBP13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
AC087235.1-201ENST00000538297 SSC5DA1L4H1 1573 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 STK25O00506 426 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 ORC4O43929 436 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 SLC34A2O95436 690 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 INHBEP58166 350 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 PPATQ06203 517 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 DEFB115Q30KQ5 88 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 CCDC178Q5BJE1 867 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 AKNAD1Q5T1N1 836 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 DLK2Q6UY11 383 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 MFSD6Q6ZSS7 791 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
AC087235.1-201ENST00000538297 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 SHMT1P34896 483 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.321e-8■■■■■ 74.7
AC087235.1-201ENST00000538297 TRDNQ13061 729 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 VGLL4Q14135 290 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 ABCB5Q2M3G0 1257 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 TSGA10IPQ3SY00 556 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 KRT23Q9C075 422 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 AS3MTQ9HBK9 375 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 SYNPO2Q9UMS6 1093 aa13.08□□□□□ -0.32
AC087235.1-201ENST00000538297 SPDYE5A6NIY4 337 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 USP17L5A8MUK1 530 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 CXCL11O14625 94 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 MCCP23508 829 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 PTH1RQ03431 593 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 NOGQ13253 232 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 PRKG1Q13976 671 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 KRT32Q14532 448 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 ESR2Q92731 530 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 MTA3Q9BTC8 594 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 IL25Q9H293 177 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 DNAJC18Q9H819 358 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
AC087235.1-201ENST00000538297 CYP2D7A0A087X1C5 515 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 CYP2D6P10635 497 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 PTPRAP18433 802 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 INPP5BP32019 993 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 MAP2K2P36507 400 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 PPIL2Q13356 520 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 ZKSCAN4Q969J2 545 aaPredicted RBP13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 SH2D4AQ9H788 454 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
AC087235.1-201ENST00000538297 LAMB1P07942 1786 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 C19orf81C9J6K1 198 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 RASA1P20936 1047 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 SPRYD7Q5W111 196 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 KCNB2Q92953 911 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 DYNLL2Q96FJ2 89 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 TTC14Q96N46 770 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 ZBTB21Q9ULJ3 1066 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
AC087235.1-201ENST00000538297 SIPA1L1O43166 1804 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 CYP21A2P08686 494 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 SLC10A3P09131 477 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 TSPY3P0CV98 308 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 TSPY8P0CW00 308 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 HSPA4P34932 840 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 GTF2A2P52657 109 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 ANAPC15P60006 121 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 SNAPC2Q13487 334 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 FASTKD5Q7L8L6 764 aaKnown RBP13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
AC087235.1-201ENST00000538297 ZNF280CQ8ND82 737 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms