RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SRBD1Q8N5C6 995 aaKnown RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 CNNM3Q8NE01 707 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 RBM17Q96I25 401 aaKnown RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 TRIM75PA6NK02 468 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 BBOX1O75936 387 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 USP5P45974 858 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 GRIN1Q05586 938 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 PNOCQ13519 176 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 NPY5RQ15761 445 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 DNTTIP2Q5QJE6 756 aaKnown RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
SLC28A1-204ENST00000538177 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 NEMFO60524 1076 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 IL1R1P14778 569 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 HSPA1LP34931 641 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 UFL1O94874 794 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 BMP15O95972 392 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 TPM4P67936 248 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 TFAP4Q01664 338 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 LRRC8AQ8IWT6 810 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 GPR101Q96P66 508 aaPredicted RBP13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
SLC28A1-204ENST00000538177 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 KIF5BP33176 963 aa13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 CRAMP1Q96RY5 1269 aa13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 IL17RBQ9NRM6 502 aa13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
SLC28A1-204ENST00000538177 SCG2P13521 617 aa13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 ATP2B1P20020 1258 aa13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 KAT14Q9H8E8 782 aa13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.31
SLC28A1-204ENST00000538177 UQCRHLA0A096LP55 91 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 POLR2DO15514 142 aaKnown RBP13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 UQCRHP07919 91 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 DDR1Q08345 913 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 CSRNP2Q9H175 543 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
SLC28A1-204ENST00000538177 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 SARSP49591 514 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 GSDMDP57764 484 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 POSTNQ15063 836 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 MKNK2Q9HBH9 465 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 SERTAD1Q9UHV2 236 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 FOXN1O15353 648 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 MYO1BO43795 1136 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 MYL5Q02045 173 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 OLFM4Q6UX06 510 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 MYRIPQ8NFW9 859 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 TBC1D16Q8TBP0 767 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 XPO4Q9C0E2 1151 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 POLLQ9UGP5 575 aa13.07□□□□□ -0.32
SLC28A1-204ENST00000538177 BMP6P22004 513 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 BTDP43251 543 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 GNAQP50148 359 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 PLCD1P51178 756 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 NLRP5P59047 1200 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 GRM4Q14833 912 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 SLC4A8Q2Y0W8 1093 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
SLC28A1-204ENST00000538177 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms