RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 USP17L20D6RJB6 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 MPHOSPH10O00566 681 aaKnown RBP25.75■■□□□ 1.71
CCDC78-215ENST00000538176 ECM2O94769 699 aaPredicted RBP25.75■■□□□ 1.71
CCDC78-215ENST00000538176 HERVK_113P62684 666 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 UBXN2AP68543 259 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 PRKCZQ05513 592 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 USP17L24Q0WX57 530 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 HTTP42858 3142 aa25.75■■□□□ 1.71
CCDC78-215ENST00000538176 SBK1Q52WX2 424 aa25.74■■□□□ 1.71
CCDC78-215ENST00000538176 TSHZ3Q63HK5 1081 aa25.74■■□□□ 1.71
CCDC78-215ENST00000538176 TICAM2Q86XR7 235 aa25.74■■□□□ 1.71
CCDC78-215ENST00000538176 GPRC5AQ8NFJ5 357 aa25.74■■□□□ 1.71
CCDC78-215ENST00000538176 SH3TC2Q8TF17 1288 aa25.74■■□□□ 1.71
CCDC78-215ENST00000538176 CAPN2P17655 700 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 GUCY1A2P33402 732 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 FLT3LGP49771 235 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 SEPT2Q15019 361 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 CTR9Q6PD62 1173 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 C16orf86Q6ZW13 317 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 OSBP2Q969R2 916 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 SH2D4AQ9H788 454 aa25.73■■□□□ 1.71
CCDC78-215ENST00000538176 KIAA0100Q14667 2235 aaKnown RBP25.72■■□□□ 1.71
CCDC78-215ENST00000538176 RBBP6Q7Z6E9 1792 aaKnown RBP25.72■■□□□ 1.71
CCDC78-215ENST00000538176 POTEFA5A3E0 1075 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 CHGBP05060 677 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 CYP2D6P10635 497 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 CDK8P49336 464 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 CATSPERGQ6ZRH7 1159 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 NKX2-3Q8TAU0 364 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 ZNF287Q9HBT7 754 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 BIN2Q9UBW5 565 aaPredicted RBP25.72■■□□□ 1.71
CCDC78-215ENST00000538176 STAP2Q9UGK3 403 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 ZSWIM8A7E2V4 1837 aa25.72■■□□□ 1.71
CCDC78-215ENST00000538176 ACER1Q8TDN7 264 aa25.71■■□□□ 1.71
CCDC78-215ENST00000538176 DYNLL2Q96FJ2 89 aa25.71■■□□□ 1.71
CCDC78-215ENST00000538176 FSD1Q9BTV5 496 aa25.71■■□□□ 1.71
CCDC78-215ENST00000538176 ARHGEF10LQ9HCE6 1279 aa25.71■■□□□ 1.71
CCDC78-215ENST00000538176 GABRQQ9UN88 632 aa25.71■■□□□ 1.71
CCDC78-215ENST00000538176 SALL3Q9BXA9 1300 aa25.7■■□□□ 1.71
CCDC78-215ENST00000538176 GSG1L2A8MUP6 293 aa25.7■■□□□ 1.7
CCDC78-215ENST00000538176 PATL2C9JE40 543 aaKnown RBP25.7■■□□□ 1.7
CCDC78-215ENST00000538176 GPAA1O43292 621 aa25.7■■□□□ 1.7
CCDC78-215ENST00000538176 ADCY3O60266 1144 aa25.7■■□□□ 1.7
CCDC78-215ENST00000538176 ZYXQ15942 572 aaKnown RBP25.7■■□□□ 1.7
CCDC78-215ENST00000538176 CCAR1Q8IX12 1150 aaKnown RBP25.7■■□□□ 1.7
CCDC78-215ENST00000538176 LPAR1Q92633 364 aa25.7■■□□□ 1.7
CCDC78-215ENST00000538176 NACAP1Q9BZK3 213 aa25.7■■□□□ 1.7
CCDC78-215ENST00000538176 RABGAP1Q9Y3P9 1069 aa25.7■■□□□ 1.7
CCDC78-215ENST00000538176 BAZ2AQ9UIF9 1905 aaKnown RBP25.69■■□□□ 1.7
CCDC78-215ENST00000538176 VCAM1P19320 739 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 MAPK4P31152 587 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 CCNA1P78396 465 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 LBX2Q6XYB7 198 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 SLC44A5Q8NCS7 719 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 OTUD7AQ8TE49 926 aaPredicted RBP25.69■■□□□ 1.7
CCDC78-215ENST00000538176 EVI5LQ96CN4 794 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 KANSL2Q9H9L4 492 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 HOXC10Q9NYD6 342 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 RBPJLQ9UBG7 517 aa25.69■■□□□ 1.7
CCDC78-215ENST00000538176 SMC5Q8IY18 1101 aa25.68■■□□□ 1.7
CCDC78-215ENST00000538176 CENPFP49454 3210 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 APPP05067 770 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 EN2P19622 333 aaPredicted RBP25.67■■□□□ 1.7
CCDC78-215ENST00000538176 PDE1AP54750 535 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 ERVK-9P63128 1117 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 ERVK-24P63145 666 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 EVX2Q03828 476 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 TMX2Q9Y320 296 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 MYH8P13535 1937 aa25.67■■□□□ 1.7
CCDC78-215ENST00000538176 CYP2D7A0A087X1C5 515 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 AKR1B1P15121 316 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 TDO2P48775 406 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 ICA1Q05084 483 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 COG2Q14746 738 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 ZMYM1Q5SVZ6 1142 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 SOCS4Q8WXH5 440 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 RPAP3Q9H6T3 665 aaPredicted RBP25.66■■□□□ 1.7
CCDC78-215ENST00000538176 MKNK2Q9HBH9 465 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 GJD2Q9UKL4 321 aa25.66■■□□□ 1.7
CCDC78-215ENST00000538176 A0A1W2PRG0 241 aa25.65■■□□□ 1.7
CCDC78-215ENST00000538176 GJB1P08034 283 aa25.65■■□□□ 1.7
CCDC78-215ENST00000538176 NUDT12Q9BQG2 462 aa25.65■■□□□ 1.7
CCDC78-215ENST00000538176 RNF208Q9H0X6 261 aa25.65■■□□□ 1.7
CCDC78-215ENST00000538176 TXNRD2Q9NNW7 524 aa25.65■■□□□ 1.7
CCDC78-215ENST00000538176 MINDY4BA8MYZ0 360 aa25.64■■□□□ 1.7
CCDC78-215ENST00000538176 SLC3A2P08195 630 aaKnown RBP25.64■■□□□ 1.7
CCDC78-215ENST00000538176 TRMT44Q8IYL2 757 aaKnown RBP25.64■■□□□ 1.7
CCDC78-215ENST00000538176 IFNL3Q8IZI9 196 aa25.64■■□□□ 1.7
CCDC78-215ENST00000538176 PAGR1Q9BTK6 254 aa25.64■■□□□ 1.7
CCDC78-215ENST00000538176 DOCK3Q8IZD9 2030 aa25.64■■□□□ 1.69
CCDC78-215ENST00000538176 M0R2C6 588 aa25.63■■□□□ 1.69
CCDC78-215ENST00000538176 MYCP01106 439 aaPredicted RBP25.63■■□□□ 1.69
CCDC78-215ENST00000538176 XRCC5P13010 732 aaKnown RBP25.63■■□□□ 1.69
CCDC78-215ENST00000538176 CCL5P13501 91 aa25.63■■□□□ 1.69
CCDC78-215ENST00000538176 MTFR1Q15390 333 aa25.63■■□□□ 1.69
CCDC78-215ENST00000538176 Q3C1V9 767 aa25.63■■□□□ 1.69
CCDC78-215ENST00000538176 VCPKMTQ9H867 229 aa25.63■■□□□ 1.69
CCDC78-215ENST00000538176 SUPT16HQ9Y5B9 1047 aaKnown RBP25.63■■□□□ 1.69
CCDC78-215ENST00000538176 PDE4DIPQ5VU43 2346 aa25.63■■□□□ 1.69
CCDC78-215ENST00000538176 ROBO3Q96MS0 1386 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms