RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 GPR161Q8N6U8 529 aaKnown RBP16.06■□□□□ 0.16
CLPB-209ENST00000538039 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
CLPB-209ENST00000538039 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
CLPB-209ENST00000538039 MYH6P13533 1939 aa16.06■□□□□ 0.16
CLPB-209ENST00000538039 CCT6AP40227 531 aaKnown RBP16.05■□□□□ 0.16
CLPB-209ENST00000538039 TDO2P48775 406 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 ERVK-24P63145 666 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 PUM3Q15397 648 aaKnown RBP16.05■□□□□ 0.16
CLPB-209ENST00000538039 SEC23AQ15436 765 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 ZNF174Q15697 407 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
CLPB-209ENST00000538039 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
CLPB-209ENST00000538039 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 LPIN2Q92539 896 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 NUP98P52948 1817 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
CLPB-209ENST00000538039 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 MINDY4BA8MYZ0 360 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 LONRF2Q1L5Z9 754 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 CDKAL1Q5VV42 579 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 TRIM10Q9UDY6 481 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 DOCK2Q92608 1830 aa16.05■□□□□ 0.16
CLPB-209ENST00000538039 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 SUSD4Q5VX71 490 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
CLPB-209ENST00000538039 BCORQ6W2J9 1755 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 PDE8AO60658 829 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 DEXIO95424 95 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
CLPB-209ENST00000538039 MAPK8IP1Q9UQF2 711 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
CLPB-209ENST00000538039 NID2Q14112 1375 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 XDHP47989 1333 aa16.04■□□□□ 0.16
CLPB-209ENST00000538039 NMT2O60551 498 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 ZNF569Q5MCW4 686 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 BAZ2AQ9UIF9 1905 aaKnown RBP16.03■□□□□ 0.16
CLPB-209ENST00000538039 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 TNKSO95271 1327 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 TXLNAP40222 546 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLPB-209ENST00000538039 ENAHQ8N8S7 591 aaPredicted RBP16.03■□□□□ 0.16
CLPB-209ENST00000538039 RABGGTAQ92696 567 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 PPARAQ07869 468 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
CLPB-209ENST00000538039 DHX8Q14562 1220 aaKnown RBP16.03■□□□□ 0.16
CLPB-209ENST00000538039 SPATA1Q5VX52 437 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 SLC35F6Q8N357 371 aa16.03■□□□□ 0.16
CLPB-209ENST00000538039 MYO1BO43795 1136 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 MFAP3LO75121 409 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 DYNLL1P63167 89 aaKnown RBP16.02■□□□□ 0.16
CLPB-209ENST00000538039 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 TRIM22Q8IYM9 498 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
CLPB-209ENST00000538039 PANX2Q96RD6 677 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 PHF20Q9BVI0 1012 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 KRT23Q9C075 422 aa16.02■□□□□ 0.16
CLPB-209ENST00000538039 SYNRGQ9UMZ2 1314 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 ITGB4P16144 1822 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 TAF1P21675 1872 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 TULP2O00295 520 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 MAP2K7O14733 419 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 STARD3NLO95772 234 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 CCDC175P0C221 793 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 ERCC5P28715 1186 aaPredicted RBP16.02■□□□□ 0.15
CLPB-209ENST00000538039 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.15
CLPB-209ENST00000538039 ARHGAP25P42331 645 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 CHMP4BP1P59074 171 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.15
CLPB-209ENST00000538039 ARFGAP3Q9NP61 516 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.15
CLPB-209ENST00000538039 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.15
CLPB-209ENST00000538039 RHOXF2BP0C7M4 288 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 NOA1Q8NC60 698 aaKnown RBP16.01■□□□□ 0.15
CLPB-209ENST00000538039 TNFRSF25Q93038 417 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 CHP1Q99653 195 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 RHOXF2Q9BQY4 288 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 VPS16Q9H269 839 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 PDE11AQ9HCR9 933 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 MCM6Q14566 821 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 RASGRP2Q7LDG7 609 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 ADAM21Q9UKJ8 722 aa16.01■□□□□ 0.15
CLPB-209ENST00000538039 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
CLPB-209ENST00000538039 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.15
CLPB-209ENST00000538039 KRT31Q15323 416 aa16■□□□□ 0.15
CLPB-209ENST00000538039 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
CLPB-209ENST00000538039 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
CLPB-209ENST00000538039 CNNM2Q9H8M5 875 aa16■□□□□ 0.15
CLPB-209ENST00000538039 ABCB6Q9NP58 842 aa16■□□□□ 0.15
CLPB-209ENST00000538039 REXO2Q9Y3B8 237 aaKnown RBP16■□□□□ 0.15
CLPB-209ENST00000538039 CCDC66A2RUB6 948 aa16■□□□□ 0.15
CLPB-209ENST00000538039 VGLL3A8MV65 326 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms