RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ATP2B1P20020 1258 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 BMP6P22004 513 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 SLC35G1Q2M3R5 365 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 RILPL1Q5EBL4 403 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 SPTY2D1Q68D10 685 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 SLC44A5Q8NCS7 719 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 RTFDC1Q9BY42 306 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 UQCRHLA0A096LP55 91 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 UQCRHP07919 91 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 KRT2P35908 639 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 PDE4BQ07343 736 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 TMED8Q6PL24 325 aaPredicted RBP10.71□□□□□ -0.69
PTPRR-205ENST00000537619 ZNF804AQ7Z570 1209 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 GRAMD1CQ8IYS0 662 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 RPGRQ92834 1020 aaKnown RBP10.71□□□□□ -0.69
PTPRR-205ENST00000537619 CD209Q9NNX6 404 aa10.71□□□□□ -0.69
PTPRR-205ENST00000537619 SRPRBQ9Y5M8 271 aaKnown RBP10.71□□□□□ -0.69
PTPRR-205ENST00000537619 BRWD3Q6RI45 1802 aa10.71□□□□□ -0.7
PTPRR-205ENST00000537619 A0A087X0B3 334 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 TSPY2A6NKD2 308 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 POLRMTO00411 1230 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 CALM1P0DP23 149 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 CALM2P0DP24 149 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 CALM3P0DP25 149 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 PLCD1P51178 756 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 PPP4CP60510 307 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 AKAP17AQ02040 695 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 PROM2Q8N271 834 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 TGFBRAP1Q8WUH2 860 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 POLLQ9UGP5 575 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 SERTAD1Q9UHV2 236 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 PCDHA5Q9Y5H7 936 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 CDK5RAP2Q96SN8 1893 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 USP17L3A6NCW0 530 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 USP17L4A6NCW7 530 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 TRIM37O94972 964 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 IL1R1P14778 569 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 HMGB2P26583 209 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 USP5P45974 858 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 TFAP4Q01664 338 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 USP17L1Q7RTZ2 530 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 MAPKAPK5Q8IW41 473 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 STAG2Q8N3U4 1231 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
PTPRR-205ENST00000537619 XPO4Q9C0E2 1151 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 QTRT2Q9H974 415 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 SAP30BPQ9UHR5 308 aaKnown RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 MORC2Q9Y6X9 1032 aaPredicted RBP10.7□□□□□ -0.7
PTPRR-205ENST00000537619 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
PTPRR-205ENST00000537619 ATP1A3P13637 1013 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 ATP2B4P23634 1241 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 BTDP43251 543 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 ST5P78524 1137 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 CCZ1BP86790 482 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 CCZ1P86791 482 aaPredicted RBP10.69□□□□□ -0.7
PTPRR-205ENST00000537619 RASGRP2Q7LDG7 609 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 LRRC8AQ8IWT6 810 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
PTPRR-205ENST00000537619 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
PTPRR-205ENST00000537619 IFNKQ9P0W0 207 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
PTPRR-205ENST00000537619 BAZ2BQ9UIF8 2168 aaKnown RBP10.69□□□□□ -0.7
PTPRR-205ENST00000537619 IKBKBO14920 756 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 IGSF3O75054 1194 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 SCG2P13521 617 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 RASA1P20936 1047 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 HOXA10P31260 410 aaPredicted RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 RHBDL3P58872 404 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 PFKFB3Q16875 520 aaPredicted RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 SLC27A3Q5K4L6 730 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 DNTTIP2Q5QJE6 756 aaKnown RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 ELOA2Q8IYF1 753 aaPredicted RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 TBC1D16Q8TBP0 767 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 DPF2Q92785 391 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 RBM17Q96I25 401 aaKnown RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 PODXL2Q9NZ53 605 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 ANKRD31Q8N7Z5 1873 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 KLRG2A4D1S0 409 aaPredicted RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 GSTO1P78417 241 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 POSTNQ15063 836 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 ZRSR1Q15695 479 aaKnown RBP10.68□□□□□ -0.7
PTPRR-205ENST00000537619 ZNF174Q15697 407 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 ZNF827Q17R98 1081 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 FILIP1Q7Z7B0 1213 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 PDILTQ8N807 584 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms