RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 IFIT1BQ5T764 474 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 RASGRP2Q7LDG7 609 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 ANP32EQ9BTT0 268 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 TCP11L1Q9NUJ3 509 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 STX8Q9UNK0 236 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 HPS5Q9UPZ3 1129 aa18.38■□□□□ 0.53
SFSWAP-206ENST00000537582 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 EVCP57679 992 aa18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 APOA5Q6Q788 366 aa18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 SGMS1Q86VZ5 419 aa18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 CCDC144CPQ8IYA2 1237 aa18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 MTMR4Q9NYA4 1195 aa18.37■□□□□ 0.53
SFSWAP-206ENST00000537582 CAP2P40123 477 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 CCT2P78371 535 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 CDC37L1Q7L3B6 337 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 SIAH1Q8IUQ4 282 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 CCDC83Q8IWF9 413 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 TMEM47Q9BQJ4 181 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 ZBTB21Q9ULJ3 1066 aa18.36■□□□□ 0.53
SFSWAP-206ENST00000537582 CCDC69A6NI79 296 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 NOVP48745 357 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 SCRN1Q12765 414 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 SUPT20HL1Q3ZLR7 823 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 DCAF15Q66K64 600 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 MOB2Q70IA6 237 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 LDHDQ86WU2 507 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 MICU3Q86XE3 530 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 ZNF654Q8IZM8 581 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 LRRC47Q8N1G4 583 aaKnown RBP18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 ZKSCAN4Q969J2 545 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 WRNIP1Q96S55 665 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 ZNF341Q9BYN7 854 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
SFSWAP-206ENST00000537582 NT5C2P49902 561 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 ANKS1AQ92625 1134 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 SLC12A7Q9Y666 1083 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 PFKFB2O60825 505 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 PPFIA3O75145 1194 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 USP2O75604 605 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 IL27Q8NEV9 243 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 ZNF274Q96GC6 653 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 ZSCAN31Q96LW9 406 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 SLKQ9H2G2 1235 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
SFSWAP-206ENST00000537582 ZBTB43O43298 467 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 CDC27P30260 824 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 ICA1Q05084 483 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 CUL4AQ13619 759 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 ACER1Q8TDN7 264 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 GTF3C6Q969F1 213 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 KLRG1Q96E93 195 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 KAT14Q9H8E8 782 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 CABP5Q9NP86 173 aa18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 SH2B1Q9NRF2 756 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-206ENST00000537582 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 TTLL1O95922 423 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 TROAPQ12815 778 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 PNMA1Q8ND90 353 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 HOOK2Q96ED9 719 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 ZNF408Q9H9D4 720 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 GPBP1L1Q9HC44 474 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 FAM217BQ9NTX9 383 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-206ENST00000537582 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 CTNND1O60716 968 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 ECE1P42892 770 aa18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 CCDC178Q5BJE1 867 aa18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 CATIPQ7Z7H3 387 aa18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 ATAD5Q96QE3 1844 aa18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 PAPPA2Q9BXP8 1791 aa18.31■□□□□ 0.52
SFSWAP-206ENST00000537582 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 ADD1P35611 737 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 CMTR1Q8N1G2 835 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 KIF3CO14782 793 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 JAK2O60674 1132 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 ASNSP08243 561 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 SCYL3Q8IZE3 742 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 NYAP2Q9P242 653 aa18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-206ENST00000537582 OTOFQ9HC10 1997 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 DDAH1O94760 285 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms