RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 GRIK5Q16478 980 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 ZNF579Q8NAF0 562 aaKnown RBP17.99■□□□□ 0.47
MKS1-204ENST00000537529 KAT14Q9H8E8 782 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 HOOK1Q9UJC3 728 aaKnown RBP17.99■□□□□ 0.47
MKS1-204ENST00000537529 TUBE1Q9UJT0 475 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 BIN1O00499 593 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 TFAP4Q01664 338 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 KRBA2Q6ZNG9 492 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 CCDC186Q7Z3E2 898 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 DGKHQ86XP1 1220 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 ELOA2Q8IYF1 753 aaPredicted RBP17.99■□□□□ 0.47
MKS1-204ENST00000537529 SHISA4Q96DD7 197 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
MKS1-204ENST00000537529 SPTLC3Q9NUV7 552 aa17.99■□□□□ 0.47
MKS1-204ENST00000537529 NAV1Q8NEY1 1877 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 MYH6P13533 1939 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 KLRG2A4D1S0 409 aaPredicted RBP17.98■□□□□ 0.47
MKS1-204ENST00000537529 TRIM75PA6NK02 468 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 BMP15O95972 392 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 PLCG2P16885 1265 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 SLF2Q8IX21 1173 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 SRBD1Q8N5C6 995 aaKnown RBP17.98■□□□□ 0.47
MKS1-204ENST00000537529 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
MKS1-204ENST00000537529 R3HCC1Q9Y3T6 440 aaKnown RBP17.98■□□□□ 0.47
MKS1-204ENST00000537529 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
MKS1-204ENST00000537529 hCG_1642624A0A1W2PR95 340 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 SMTNL1A8MU46 457 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 TBC1D16Q8TBP0 767 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 KIAA1524Q8TCG1 905 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 TGFBRAP1Q8WUH2 860 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 ANKS1AQ92625 1134 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 LRRC37AA6NMS7 1700 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 BTDP43251 543 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 DYNLL2Q96FJ2 89 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 PYCARDQ9ULZ3 195 aa17.97■□□□□ 0.47
MKS1-204ENST00000537529 SCG2P13521 617 aa17.96■□□□□ 0.47
MKS1-204ENST00000537529 ATP2B1P20020 1258 aa17.96■□□□□ 0.47
MKS1-204ENST00000537529 TCP11L1Q9NUJ3 509 aa17.96■□□□□ 0.47
MKS1-204ENST00000537529 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
MKS1-204ENST00000537529 GPR75-ASB3A0A0A6YYF3 556 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 PPEF1O14829 653 aaPredicted RBP17.95■□□□□ 0.46
MKS1-204ENST00000537529 PNOCQ13519 176 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 LONRF3Q496Y0 759 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 METTL16Q86W50 562 aaKnown RBP17.95■□□□□ 0.46
MKS1-204ENST00000537529 MAPKAPK5Q8IW41 473 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 POLLQ9UGP5 575 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 C6orf229H3BNL8 230 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 IKBKBO14920 756 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 GNAQP50148 359 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
MKS1-204ENST00000537529 DNTTIP2Q5QJE6 756 aaKnown RBP17.95■□□□□ 0.46
MKS1-204ENST00000537529 MFSD14BQ5SR56 506 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 TEX11Q8IYF3 940 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 ZNF444Q8N0Y2 327 aaPredicted RBP17.95■□□□□ 0.46
MKS1-204ENST00000537529 PNMA1Q8ND90 353 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 IL17RBQ9NRM6 502 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 NRBP1Q9UHY1 535 aa17.95■□□□□ 0.46
MKS1-204ENST00000537529 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 C17orf53Q8N3J3 647 aaPredicted RBP17.94■□□□□ 0.46
MKS1-204ENST00000537529 TNFRSF25Q93038 417 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 SAP30BPQ9UHR5 308 aaKnown RBP17.94■□□□□ 0.46
MKS1-204ENST00000537529 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 NLRP5P59047 1200 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 GRIN1Q05586 938 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 GRM4Q14833 912 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 SPECC1Q5M775 1068 aa17.94■□□□□ 0.46
MKS1-204ENST00000537529 FAM163AQ96GL9 167 aaPredicted RBP17.94■□□□□ 0.46
MKS1-204ENST00000537529 FAM205AQ6ZU69 1335 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 LTBP1Q14766 1721 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 NEMFO60524 1076 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 NPY5RQ15761 445 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 KANK3Q6NY19 840 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 OLFM4Q6UX06 510 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 FERMT2Q96AC1 680 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 GAKO14976 1311 aa17.93■□□□□ 0.46
MKS1-204ENST00000537529 CALML3P27482 149 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 EARS2Q5JPH6 523 aaKnown RBP17.92■□□□□ 0.46
MKS1-204ENST00000537529 TTC38Q5R3I4 469 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 PROM2Q8N271 834 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 CSRNP2Q9H175 543 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 SH3GLB2Q9NR46 395 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 ATP6V0A2Q9Y487 856 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 DDX60LQ5H9U9 1706 aaKnown RBP17.92■□□□□ 0.46
MKS1-204ENST00000537529 POLR2DO15514 142 aaKnown RBP17.92■□□□□ 0.46
MKS1-204ENST00000537529 RASA1P20936 1047 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 TRAPPC10P48553 1259 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 PLCD1P51178 756 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 POSTNQ15063 836 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 CCDC144BQ3MJ40 725 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms