RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 KRT222Q8N1A0 295 aa16.34■□□□□ 0.21
USP44-203ENST00000537435 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
USP44-203ENST00000537435 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
USP44-203ENST00000537435 PHLPP1O60346 1717 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 WNT7AO00755 349 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 STX10O60499 249 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 IGSF3O75054 1194 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 H2AFXP16104 143 aaPredicted RBP16.33■□□□□ 0.2
USP44-203ENST00000537435 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 FAM177A1Q8N128 213 aaPredicted RBP16.33■□□□□ 0.2
USP44-203ENST00000537435 CCDC34Q96HJ3 373 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 CICQ96RK0 1608 aaPredicted RBP16.33■□□□□ 0.2
USP44-203ENST00000537435 TROAPQ12815 778 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 NR1I3Q14994 352 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 SYMPKQ92797 1274 aaKnown RBP16.33■□□□□ 0.2
USP44-203ENST00000537435 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
USP44-203ENST00000537435 ZNF446Q9NWS9 450 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 ZNF652Q9Y2D9 606 aa16.33■□□□□ 0.2
USP44-203ENST00000537435 SLFN14P0C7P3 912 aa16.32■□□□□ 0.2
USP44-203ENST00000537435 CASP1P29466 404 aa16.32■□□□□ 0.2
USP44-203ENST00000537435 ARHGAP29Q52LW3 1261 aa16.32■□□□□ 0.2
USP44-203ENST00000537435 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
USP44-203ENST00000537435 ZNF384Q8TF68 577 aa16.32■□□□□ 0.2
USP44-203ENST00000537435 PAGE5Q96GU1 130 aa16.32■□□□□ 0.2
USP44-203ENST00000537435 ZNF174Q15697 407 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 NOM1Q5C9Z4 860 aaKnown RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 KLHL10Q6JEL2 608 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 MARCH10Q8NA82 808 aaPredicted RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 MNS1Q8NEH6 495 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 FAM53CQ9NYF3 392 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 DUOX1Q9NRD9 1551 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 A0A1B0GTH6 734 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 CALM1P0DP23 149 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 CALM2P0DP24 149 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 CALM3P0DP25 149 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 UBXN4Q92575 508 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 FERMT2Q96AC1 680 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 MINPP1Q9UNW1 487 aa16.31■□□□□ 0.2
USP44-203ENST00000537435 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
USP44-203ENST00000537435 GOLGA6L9A6NEM1 432 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 USP17L12C9JPN9 530 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 USP17L21D6R901 530 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 BMP15O95972 392 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 FGRP09769 529 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 STX17P56962 302 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
USP44-203ENST00000537435 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
USP44-203ENST00000537435 NPY5RQ15761 445 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 TNFRSF25Q93038 417 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 CARD6Q9BX69 1037 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
USP44-203ENST00000537435 CACNA1SQ13698 1873 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 TEX33O43247 280 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 DDAH1O94760 285 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
USP44-203ENST00000537435 CLCN6P51797 869 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 EVX2Q03828 476 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 TTC38Q5R3I4 469 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 SPATA31A1Q5TZJ5 1347 aa16.3■□□□□ 0.2
USP44-203ENST00000537435 GNG11P61952 73 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 DPYDQ12882 1025 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 CUL4BQ13620 913 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
USP44-203ENST00000537435 APTXQ7Z2E3 356 aaKnown RBP16.29■□□□□ 0.2
USP44-203ENST00000537435 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 SYNRGQ9UMZ2 1314 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 LAMB2P55268 1798 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 TADA3O75528 432 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 CASQ1P31415 396 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
USP44-203ENST00000537435 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
USP44-203ENST00000537435 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
USP44-203ENST00000537435 WDR24Q96S15 920 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 MYH6P13533 1939 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
USP44-203ENST00000537435 AKR1B15C9JRZ8 316 aaPredicted RBP16.28■□□□□ 0.2
USP44-203ENST00000537435 NMT2O60551 498 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 PTGDRQ13258 359 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 CTCFLQ8NI51 663 aaPredicted RBP16.28■□□□□ 0.2
USP44-203ENST00000537435 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 DESI2Q9BSY9 194 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP44-203ENST00000537435 RREB1Q92766 1687 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
USP44-203ENST00000537435 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
USP44-203ENST00000537435 THRAP3Q9Y2W1 955 aaKnown RBP16.28■□□□□ 0.2
USP44-203ENST00000537435 KLRK1P26718 216 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms