RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-217ENST00000537162 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 HOXC6P09630 235 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 LMOD3Q0VAK6 560 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 MTMR2Q13614 643 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-217ENST00000537162 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 COL4A6Q14031 1691 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
CPSF7-217ENST00000537162 MYO15AQ9UKN7 3530 aa12.08□□□□□ -0.47
CPSF7-217ENST00000537162 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
CPSF7-217ENST00000537162 PGK1P00558 417 aa12.08□□□□□ -0.48
CPSF7-217ENST00000537162 PTPN5P54829 565 aa12.08□□□□□ -0.48
CPSF7-217ENST00000537162 WDR78Q5VTH9 848 aa12.08□□□□□ -0.48
CPSF7-217ENST00000537162 PSRC1Q6PGN9 363 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-217ENST00000537162 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
CPSF7-217ENST00000537162 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-217ENST00000537162 CWC22Q9HCG8 908 aaKnown RBP12.08□□□□□ -0.48
CPSF7-217ENST00000537162 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
CPSF7-217ENST00000537162 MED19A0JLT2 244 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-217ENST00000537162 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 ENTPD3O75355 529 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 SLC5A1P13866 664 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 PRDX5P30044 214 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 JAG1P78504 1218 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 GRB14Q14449 540 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 G2E3Q7L622 706 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 OTOP2Q7RTS6 562 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 SPRED2Q7Z698 418 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 KMT2EQ8IZD2 1858 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 TOX2Q96NM4 488 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 PPP1R12CQ9BZL4 782 aa12.07□□□□□ -0.48
CPSF7-217ENST00000537162 ALG13Q9NP73 1137 aaKnown RBP12.07□□□□□ -0.48
CPSF7-217ENST00000537162 MYH2Q9UKX2 1941 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 USP17L5A8MUK1 530 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 APBB1O00213 710 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 CA3P07451 260 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 CYP2C18P33260 490 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-217ENST00000537162 TAF7LQ5H9L4 462 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 MFSD14AQ96MC6 490 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 PNNQ9H307 717 aaKnown RBP12.06□□□□□ -0.48
CPSF7-217ENST00000537162 IL23AQ9NPF7 189 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 PCDHA11Q9Y5I1 949 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 GAKO14976 1311 aa12.06□□□□□ -0.48
CPSF7-217ENST00000537162 LPXNO60711 386 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 FGBP02675 491 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 CAP2P40123 477 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 GRB10Q13322 594 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 PICALMQ13492 652 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 CCDC174Q6PII3 467 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 TMEM199Q8N511 208 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-217ENST00000537162 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-217ENST00000537162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.05□□□□□ -0.488e-6■■□□□ 11.4
CPSF7-217ENST00000537162 XPNPEP3Q9NQH7 507 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
CPSF7-217ENST00000537162 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 BACE1P56817 501 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 ASCL5Q7RTU5 278 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 UBE2ZQ9H832 354 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-217ENST00000537162 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 BTBD7Q9P203 1132 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 UMODL1Q5DID0 1318 aa12.04□□□□□ -0.48
CPSF7-217ENST00000537162 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-217ENST00000537162 TBC1D12O60347 775 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 COBLO75128 1261 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
CPSF7-217ENST00000537162 ID4P47928 161 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 LEXMQ3ZCV2 418 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 CCDC146Q8IYE0 955 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 VWCEQ96DN2 955 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 CNTNAP3BQ96NU0 1288 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 WDR18Q9BV38 432 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 CNTNAP3Q9BZ76 1288 aa12.03□□□□□ -0.48
CPSF7-217ENST00000537162 TECTAO75443 2155 aa12.02□□□□□ -0.48
CPSF7-217ENST00000537162 ZNF853P0CG23 659 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 KCNA5P22460 613 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 ACLYP53396 1101 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-217ENST00000537162 TRIM26Q12899 539 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-217ENST00000537162 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-217ENST00000537162 TSPYL6Q8N831 410 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 COL26A1Q96A83 441 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 TBC1D2Q9BYX2 928 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 STARD7Q9NQZ5 370 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
CPSF7-217ENST00000537162 CFAP47Q6ZTR5 3102 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms