RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 EPB41P11171 864 aaKnown RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 KRT13P13646 458 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 BIRC2Q13490 618 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 SDCCAG8Q86SQ7 713 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 SAAL1Q96ER3 474 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 STK38LQ9Y2H1 464 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 CMA1P23946 247 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 TNNC1P63316 161 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 MXRA7P84157 204 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 ARID5AQ03989 594 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 SPTY2D1Q68D10 685 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 G3V3G9 751 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 ADCY2Q08462 1091 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 PPP1R7Q15435 360 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 GLE1Q53GS7 698 aaKnown RBP6.02□□□□□ -1.45
PTPRD-213ENST00000537002 DCAF8Q5TAQ9 597 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 MAP4K1Q92918 833 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 NFE2L3Q9Y4A8 694 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 TMEM2Q9UHN6 1383 aa6.02□□□□□ -1.45
PTPRD-213ENST00000537002 FGFR1OPO95684 399 aaKnown RBP6.01□□□□□ -1.45
PTPRD-213ENST00000537002 GBP1P32455 592 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 GUCY2FP51841 1108 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 RESTQ13127 1097 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 SETDB1Q15047 1291 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 KCTD16Q68DU8 428 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 LRRC31Q6UY01 552 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ABTB2Q8N961 1025 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 PPFIBP2Q8ND30 876 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 MMRN2Q9H8L6 949 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ABCB6Q9NP58 842 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 CWC25Q9NXE8 425 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ZBTB12Q9Y330 459 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-213ENST00000537002 EDC4Q6P2E9 1401 aaKnown RBP6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ARMCX5Q6P1M9 558 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 SASH3O75995 380 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ZNF202O95125 648 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ADAMTS2O95450 1211 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 MCMDC2Q4G0Z9 681 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 WLSQ5T9L3 541 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ANO1Q5XXA6 986 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 KLHL7Q8IXQ5 586 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 NAPBQ9H115 298 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 TAB2Q9NYJ8 693 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ZMYND10O75800 440 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 G2E3Q7L622 706 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 MAB21L3Q8N8X9 362 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ENGASEQ8NFI3 743 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 STMN4Q9H169 189 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-213ENST00000537002 FAM114A2Q9NRY5 505 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 EXOC1Q9NV70 894 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 ZRANB1Q9UGI0 708 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 TSKSQ9UJT2 592 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC194A0A1B0GVG4 234 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 BMP15O95972 392 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 PTPRMP28827 1452 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 PDE6BP35913 854 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 SKOR1P84550 965 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 INTS8Q75QN2 995 aaKnown RBP6.01□□□□□ -1.45
PTPRD-213ENST00000537002 KCNH5Q8NCM2 988 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 FAM227BQ96M60 508 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 KCNH3Q9ULD8 1083 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 SYNRGQ9UMZ2 1314 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 IFT74Q96LB3 600 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 PFKFB2O60825 505 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 WAPLQ7Z5K2 1190 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 TSGA10Q9BZW7 698 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 TRIM7Q9C029 511 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 TPCN1Q9ULQ1 816 aa6.01□□□□□ -1.45
PTPRD-213ENST00000537002 UBN2Q6ZU65 1347 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 STAT6P42226 847 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 IFT88Q13099 833 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 TSNAXIP1Q2TAA8 658 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 IFT20Q8IY31 132 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 KRI1Q8N9T8 703 aaKnown RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 RASAL2Q9UJF2 1139 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 HOXA7P31268 230 aaPredicted RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 SELENOOQ9BVL4 669 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 LCMT1Q9UIC8 334 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 AKAP2Q9Y2D5 859 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 EXOC5O00471 708 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 NECTIN1Q15223 517 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 TCERG1LQ5VWI1 586 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 DHX32Q7L7V1 743 aaKnown RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 SPATA24Q86W54 205 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 SGSM3Q96HU1 749 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 KLC4Q9NSK0 619 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 GTF3C5Q9Y5Q8 519 aaPredicted RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 VWA3AA6NCI4 1184 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 ZBTB43O43298 467 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 FLOT1O75955 427 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 EPHB4P54760 987 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 GBP7Q8N8V2 638 aaPredicted RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 TRIM31Q9BZY9 425 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 TRIM4Q9C037 500 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 STRN4Q9NRL3 753 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 TUBE1Q9UJT0 475 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 CFAP73A6NFT4 308 aa6□□□□□ -1.45
PTPRD-213ENST00000537002 RANBP6O60518 1105 aaKnown RBP6□□□□□ -1.45
PTPRD-213ENST00000537002 SMIM24O75264 130 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms