RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 TMEM67Q5HYA8 995 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 IGDCC4Q8TDY8 1250 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 DPF2Q92785 391 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 NCOA5Q9HCD5 579 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 GPRC5DQ9NZD1 345 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 ANGEL1Q9UNK9 670 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 KLF18A0A0U1RQI7 1052 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 IFIT3O14879 490 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 PFKFB2O60825 505 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 PPFIA3O75145 1194 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 GABPAQ06546 454 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 TMOD2Q9NZR1 351 aa15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 R3HCC1Q9Y3T6 440 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-202ENST00000536708 ATRNL1Q5VV63 1379 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 TSPY2A6NKD2 308 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 CCT2P78371 535 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 CLEC10AQ8IUN9 316 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 FBXL16Q8N461 479 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 ENAHQ8N8S7 591 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 UBAC1Q9BSL1 405 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 ZSCAN16Q9H4T2 348 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 MKNK2Q9HBH9 465 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 SERPINB13Q9UIV8 391 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 COL2A1P02458 1487 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 MYH6P13533 1939 aa15.03■□□□□ -0
CDK5RAP3-202ENST00000536708 SHMT1P34896 483 aa15.02■□□□□ -0
CDK5RAP3-202ENST00000536708 SCRN1Q12765 414 aa15.02■□□□□ -0
CDK5RAP3-202ENST00000536708 RESTQ13127 1097 aa15.02■□□□□ -0
CDK5RAP3-202ENST00000536708 HPS5Q9UPZ3 1129 aa15.02■□□□□ -0
CDK5RAP3-202ENST00000536708 ENTPD3O75355 529 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 PCP11498 1178 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 PDIA3P30101 505 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 TFAP4Q01664 338 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 SEC23AQ15436 765 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 APOA5Q6Q788 366 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 RBM43Q6ZSC3 357 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 MICU3Q86XE3 530 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 CCDC144CPQ8IYA2 1237 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 LEO1Q8WVC0 666 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 CHMP4CQ96CF2 233 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 TMEM87BQ96K49 555 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 CSRNP1Q96S65 589 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 ZSCAN10Q96SZ4 725 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 MAP7D2Q96T17 732 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 IL17RBQ9NRM6 502 aa15.02□□□□□ -0.01
CDK5RAP3-202ENST00000536708 MYO1BO43795 1136 aa15.01□□□□□ -0.01
CDK5RAP3-202ENST00000536708 HLA-DOAP06340 250 aa15.01□□□□□ -0.01
CDK5RAP3-202ENST00000536708 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
CDK5RAP3-202ENST00000536708 FERMT3Q86UX7 667 aa15.01□□□□□ -0.01
CDK5RAP3-202ENST00000536708 DDX19AQ9NUU7 478 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-202ENST00000536708 HACL1Q9UJ83 578 aa15.01□□□□□ -0.01
CDK5RAP3-202ENST00000536708 JAK2O60674 1132 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 ADCY5O95622 1261 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 AKR1B1P15121 316 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 HIRAP54198 1017 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 WTAPQ15007 396 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 CRACR2BQ8N4Y2 399 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 SPATA32Q96LK8 384 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 USP25Q9UHP3 1055 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 H7C1D1 291 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 PTMAP06454 111 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 TSPY3P0CV98 308 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 TSPY8P0CW00 308 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 EVCP57679 992 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 RCSD1Q6JBY9 416 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 FAM173BQ6P4H8 233 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 RASGRP2Q7LDG7 609 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 NSUN7Q8NE18 718 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 NUP62CLQ9H1M0 184 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 EHD4Q9H223 541 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 DHX36Q9H2U1 1008 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 GGA3Q9NZ52 723 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 SCN4AP35499 1836 aa15□□□□□ -0.01
CDK5RAP3-202ENST00000536708 UQCRHLA0A096LP55 91 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 GRIN3BO60391 1043 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 UQCRHP07919 91 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 LIG1P18858 919 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 RBM10P98175 930 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 SART3Q15020 963 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 MAP3K11Q16584 847 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 ANGEL2Q5VTE6 544 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 IQCA1Q86XH1 822 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 FAM151AQ8WW52 585 aa14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 ZNF274Q96GC6 653 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDK5RAP3-202ENST00000536708 ERICH2A1L162 156 aa14.98□□□□□ -0.01
CDK5RAP3-202ENST00000536708 LIFRP42702 1097 aa14.98□□□□□ -0.01
CDK5RAP3-202ENST00000536708 RASA3Q14644 834 aa14.98□□□□□ -0.01
CDK5RAP3-202ENST00000536708 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-202ENST00000536708 ATL3Q6DD88 541 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms