RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, human

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-208	ENST00000536582	RANBP6	O60518	1105 aa	Known RBP	11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	CPA1	P15085	419 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	PDE4B	Q07343	736 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	TTLL12	Q14166	644 aa	Predicted RBP	11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	SUPT20HL1	Q3ZLR7	823 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	FAM47A	Q5JRC9	791 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	C16orf86	Q6ZW13	317 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	CHST3	Q7LGC8	479 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	JAKMIP1	Q96N16	626 aa	Known RBP	11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	TBC1D32	Q96NH3	1257 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	DNAJC18	Q9H819	358 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	PPP2R3B	Q9Y5P8	575 aa		11.45	□□□□□ -0.58
PAAF1-208	ENST00000536582	COL2A1	P02458	1487 aa	Predicted RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	MPHOSPH10	O00566	681 aa	Known RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	EPB41L2	O43491	1005 aa	Known RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	GDF11	O95390	407 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	SHMT1	P34896	483 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	GABPA	Q06546	454 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	TRDN	Q13061	729 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	RRP1B	Q14684	758 aa	Known RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	MOB2	Q70IA6	237 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	RALYL	Q86SE5	291 aa	Known RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	STAG1	Q8WVM7	1258 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	KCNB2	Q92953	911 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	TCEANC2	Q96MN5	208 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	ZKSCAN3	Q9BRR0	538 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	EHD4	Q9H223	541 aa		11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	RNF41	Q9H4P4	317 aa	Predicted RBP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
PAAF1-208	ENST00000536582	SSC5D	A1L4H1	1573 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	KDM4A	O75164	1064 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	AKR1B1	P15121	316 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	CAST	P20810	708 aa	Known RBP	11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	RASA1	P20936	1047 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	NF2	P35240	595 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	RBM25	P49756	843 aa	Known RBP	11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	TFAP4	Q01664	338 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	CERKL	Q49MI3	558 aa	Predicted RBP	11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	CYB5R4	Q7L1T6	521 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	NCOA7	Q8NI08	942 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	NEK1	Q96PY6	1258 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	UPF3B	Q9BZI7	483 aa	Known RBP	11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	SWAP70	Q9UH65	585 aa		11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	HERC5	Q9UII4	1024 aa	Known RBP	11.43	□□□□□ -0.58
PAAF1-208	ENST00000536582	ROBO3	Q96MS0	1386 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	TSPY2	A6NKD2	308 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	USP2	O75604	605 aa	Predicted RBP	11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	ITGBL1	O95965	494 aa	Predicted RBP	11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	INPP5B	P32019	993 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	JAG1	P78504	1218 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	KRT32	Q14532	448 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	DCAF15	Q66K64	600 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	SPNS2	Q8IVW8	549 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	ESR2	Q92731	530 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	HOOK2	Q96ED9	719 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	KIF2C	Q99661	725 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	ZNF341	Q9BYN7	854 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	LRRC2	Q9BYS8	371 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	KRT23	Q9C075	422 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	CNNM2	Q9H8M5	875 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	ZNF287	Q9HBT7	754 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	WDR70	Q9NW82	654 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	ZSWIM5	Q9P217	1185 aa		11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	ANGEL1	Q9UNK9	670 aa	Known RBP	11.42	□□□□□ -0.58
PAAF1-208	ENST00000536582	PHF20L1	A8MW92	1017 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	UBE2Q2L	H0YL09	131 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	ORC4	O43929	436 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	PPP1R12B	O60237	982 aa	Predicted RBP	11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	NMT2	O60551	498 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	CELF2	O95319	508 aa	Known RBP	11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	FGR	P09769	529 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	TSPY3	P0CV98	308 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	TSPY8	P0CW00	308 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	PSMA5	P28066	241 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	ANAPC15	P60006	121 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	ABCB5	Q2M3G0	1257 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	TSGA10IP	Q3SY00	556 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	TATDN1	Q6P1N9	297 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	BLOC1S2	Q6QNY1	142 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	CCDC84	Q86UT8	332 aa	Predicted RBP	11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	METTL16	Q86W50	562 aa	Known RBP	11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	CLEC10A	Q8IUN9	316 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	SMC1B	Q8NDV3	1235 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	WRNIP1	Q96S55	665 aa		11.41	□□□□□ -0.58
PAAF1-208	ENST00000536582	ATAD5	Q96QE3	1844 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	PRC1	O43663	620 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	TOMM70	O94826	608 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	GH2	P01242	217 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	NEK4	P51957	841 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	ANTXR2	P58335	489 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	ATP2B2	Q01814	1243 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	MAP3K10	Q02779	954 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	RAB3GAP1	Q15042	981 aa		11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	NOL8	Q76FK4	1167 aa	Known RBP	11.4	□□□□□ -0.58
PAAF1-208	ENST00000536582	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms