RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 NBPF3Q9H094 633 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 EHD4Q9H223 541 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 BOLA2Q9H3K6 86 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 EMILIN3Q9NT22 766 aa15.05■□□□□ -0
PRKDC-207ENST00000536483 MYO5AQ9Y4I1 1855 aaKnown RBP15.04■□□□□ -0
PRKDC-207ENST00000536483 PLXNB2O15031 1838 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 SOX1O00570 391 aaPredicted RBP15.04■□□□□ -0
PRKDC-207ENST00000536483 GH2P01242 217 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
PRKDC-207ENST00000536483 PRKAR2AP13861 404 aaKnown RBP15.04■□□□□ -0
PRKDC-207ENST00000536483 ADD2P35612 726 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 ERVK-9P63128 1117 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 ERVK-24P63145 666 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 UBE3CQ15386 1083 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 POTEEQ6S8J3 1075 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 SOCS4Q8WXH5 440 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 DNAJC2Q99543 621 aaKnown RBP15.04■□□□□ -0
PRKDC-207ENST00000536483 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 PORCNQ9H237 461 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 OGDHLQ9ULD0 1010 aa15.04■□□□□ -0
PRKDC-207ENST00000536483 ZMYND8Q9ULU4 1186 aaPredicted RBP15.04■□□□□ -0
PRKDC-207ENST00000536483 CDK5RAP2Q96SN8 1893 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 ZNF532Q9HCE3 1301 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 MAPK4P31152 587 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 USP5P45974 858 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 ZYXQ15942 572 aaKnown RBP15.03■□□□□ -0
PRKDC-207ENST00000536483 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 USP17L2Q6R6M4 530 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 CCAR1Q8IX12 1150 aaKnown RBP15.03■□□□□ -0
PRKDC-207ENST00000536483 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
PRKDC-207ENST00000536483 LRCH3Q96II8 777 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.03■□□□□ -0
PRKDC-207ENST00000536483 C11orf49Q9H6J7 331 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 ALPK3Q96L96 1907 aa15.03■□□□□ -0
PRKDC-207ENST00000536483 FOCADQ5VW36 1801 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 ZKSCAN1P17029 563 aaPredicted RBP15.02■□□□□ -0
PRKDC-207ENST00000536483 CACNB2Q08289 660 aaPredicted RBP15.02■□□□□ -0
PRKDC-207ENST00000536483 CCL14Q16627 93 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 GPR142Q7Z601 462 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 PLEKHH3Q7Z736 793 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 USP6NLQ92738 828 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 GDF15Q99988 308 aa15.02■□□□□ -0
PRKDC-207ENST00000536483 SALL3Q9BXA9 1300 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 COL6A3P12111 3177 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 SYN1P17600 705 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 RGS2P41220 211 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 RAB3GAP1Q15042 981 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 MORN1Q5T089 497 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 ZSCAN25Q6NSZ9 544 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 TTC6Q86TZ1 520 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 TRMT44Q8IYL2 757 aaKnown RBP15.01□□□□□ -0.01
PRKDC-207ENST00000536483 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
PRKDC-207ENST00000536483 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 FEZ1Q99689 392 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 CRNKL1Q9BZJ0 848 aaKnown RBP15.01□□□□□ -0.01
PRKDC-207ENST00000536483 SERPINB13Q9UIV8 391 aa15.01□□□□□ -0.01
PRKDC-207ENST00000536483 PFASO15067 1338 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L15C9J2P7 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L13C9JLJ4 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L11C9JVI0 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L18D6R9N7 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L22D6RA61 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L17D6RBQ6 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L19D6RCP7 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L20D6RJB6 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 CNMDO75829 334 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 CCND3P30281 292 aaPredicted RBP15□□□□□ -0.01
PRKDC-207ENST00000536483 BMP8BP34820 402 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 GABPAQ06546 454 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 USP17L24Q0WX57 530 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 KBTBD3Q8NAB2 608 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 C12orf42Q96LP6 360 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 CWC22Q9HCG8 908 aaKnown RBP15□□□□□ -0.01
PRKDC-207ENST00000536483 ATP8A2Q9NTI2 1148 aa15□□□□□ -0.01
PRKDC-207ENST00000536483 DDX60LQ5H9U9 1706 aaKnown RBP15□□□□□ -0.01
PRKDC-207ENST00000536483 PLCD1P51178 756 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 ABCB5Q2M3G0 1257 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 CERKLQ49MI3 558 aaPredicted RBP14.99□□□□□ -0.01
PRKDC-207ENST00000536483 LHX8Q68G74 356 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 CATSPERGQ6ZRH7 1159 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 TICAM2Q86XR7 235 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 PI4K2BQ8TCG2 481 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 ACER1Q8TDN7 264 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 APBA2Q99767 749 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
PRKDC-207ENST00000536483 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
PRKDC-207ENST00000536483 MYH1P12882 1939 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 ERC2O15083 957 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 GLRX3O76003 335 aaKnown RBP14.98□□□□□ -0.01
PRKDC-207ENST00000536483 VCAM1P19320 739 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 MAGEA10P43363 369 aaPredicted RBP14.98□□□□□ -0.01
PRKDC-207ENST00000536483 USP14P54578 494 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 MAP2K5Q13163 448 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 WDR78Q5VTH9 848 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 SMC5Q8IY18 1101 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
PRKDC-207ENST00000536483 KIAA1683Q9H0B3 1180 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms