RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 SLC6A17Q9H1V8 727 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 C19orf44Q9H6X5 657 aa5.17□□□□□ -1.58
SKA3-207ENST00000536239 CNOT6Q9ULM6 557 aaKnown RBP5.17□□□□□ -1.58
SKA3-207ENST00000536239 TPP2P29144 1249 aaPredicted RBP5.16□□□□□ -1.58
SKA3-207ENST00000536239 DSC3Q14574 896 aa5.16□□□□□ -1.58
SKA3-207ENST00000536239 NFIXQ14938 502 aa5.16□□□□□ -1.58
SKA3-207ENST00000536239 ENOX2Q16206 610 aaKnown RBP5.16□□□□□ -1.58
SKA3-207ENST00000536239 TCERG1LQ5VWI1 586 aa5.16□□□□□ -1.58
SKA3-207ENST00000536239 TMEM132EQ6IEE7 984 aa5.16□□□□□ -1.58
SKA3-207ENST00000536239 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
SKA3-207ENST00000536239 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.16□□□□□ -1.58
SKA3-207ENST00000536239 ZNF605Q86T29 641 aa5.16□□□□□ -1.58
SKA3-207ENST00000536239 DUSP15Q9H1R2 295 aaPredicted RBP5.16□□□□□ -1.58
SKA3-207ENST00000536239 TEX51A0A1B0GUA7 166 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 CELA3AP09093 270 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 ZGLP1P0C6A0 271 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 GRK4P32298 578 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 PLCB3Q01970 1234 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 GAB4Q2WGN9 574 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 ZNF385BQ569K4 471 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 OXR1Q8N573 874 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 ZNF552Q9H707 407 aaPredicted RBP5.15□□□□□ -1.59
SKA3-207ENST00000536239 CWC22Q9HCG8 908 aaKnown RBP5.15□□□□□ -1.59
SKA3-207ENST00000536239 GCM1Q9NP62 436 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 KCTD3Q9Y597 815 aa5.15□□□□□ -1.59
SKA3-207ENST00000536239 FITM1A5D6W6 292 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 TRIM13O60858 407 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 CDK8P49336 464 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 NR0B2Q15466 257 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 TIGD5Q53EQ6 642 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 WIPI1Q5MNZ9 446 aaPredicted RBP5.14□□□□□ -1.59
SKA3-207ENST00000536239 GAL3ST3Q96A11 431 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 INTS4Q96HW7 963 aaKnown RBP5.14□□□□□ -1.59
SKA3-207ENST00000536239 Q96M66 194 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 OSBPL7Q9BZF2 842 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 TRIT1Q9H3H1 467 aaKnown RBP5.14□□□□□ -1.59
SKA3-207ENST00000536239 RTEL1Q9NZ71 1219 aa5.14□□□□□ -1.59
SKA3-207ENST00000536239 YBX2Q9Y2T7 364 aaKnown RBP5.14□□□□□ -1.59
SKA3-207ENST00000536239 ETV3P41162 512 aa5.13□□□□□ -1.59
SKA3-207ENST00000536239 EGR3Q06889 387 aa5.13□□□□□ -1.59
SKA3-207ENST00000536239 TMEM151BQ8IW70 566 aa5.13□□□□□ -1.59
SKA3-207ENST00000536239 CXorf38Q8TB03 319 aa5.13□□□□□ -1.59
SKA3-207ENST00000536239 SGPP1Q9BX95 441 aa5.13□□□□□ -1.59
SKA3-207ENST00000536239 DUSP13Q9UII6 198 aa5.13□□□□□ -1.59
SKA3-207ENST00000536239 RFXAPO00287 272 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 GIPC1O14908 333 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 TREHO43280 583 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 SKOR2Q2VWA4 1001 aaPredicted RBP5.12□□□□□ -1.59
SKA3-207ENST00000536239 MRPL41Q8IXM3 137 aaKnown RBP5.12□□□□□ -1.59
SKA3-207ENST00000536239 DHX38Q92620 1227 aaKnown RBP5.12□□□□□ -1.59
SKA3-207ENST00000536239 GPR62Q9BZJ7 368 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 XYLT2Q9H1B5 865 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 TJP2Q9UDY2 1190 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 DCTN4Q9UJW0 460 aa5.12□□□□□ -1.59
SKA3-207ENST00000536239 GFRA2O00451 464 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 PDE6BP35913 854 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 KRTAP10-2P60368 255 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 SSPNQ14714 243 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 SNX17Q15036 470 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 SLC6A19Q695T7 634 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 PRRT2Q7Z6L0 340 aaPredicted RBP5.11□□□□□ -1.59
SKA3-207ENST00000536239 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
SKA3-207ENST00000536239 SPPL2CQ8IUH8 684 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 FBF1Q8TES7 1133 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 DPH2Q9BQC3 489 aaPredicted RBP5.11□□□□□ -1.59
SKA3-207ENST00000536239 GPATCH2Q9NW75 528 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 TACC3Q9Y6A5 838 aa5.11□□□□□ -1.59
SKA3-207ENST00000536239 SOWAHDA6NJG2 315 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 SASH1O94885 1247 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 SV2BQ7L1I2 683 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 GGNQ86UU5 652 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 DNAJB8Q8NHS0 232 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 TMEM87BQ96K49 555 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 C1orf115Q9H7X2 142 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 CEP131Q9UPN4 1083 aa5.1□□□□□ -1.59
SKA3-207ENST00000536239 OTOL1A6NHN0 477 aaPredicted RBP5.09□□□□□ -1.59
SKA3-207ENST00000536239 PGRP06401 933 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 LTKP29376 864 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 NFKB2Q00653 900 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 CHRNEQ04844 493 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 TTBK2Q6IQ55 1244 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 PANK1Q8TE04 598 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 SYTL4Q96C24 671 aaPredicted RBP5.09□□□□□ -1.59
SKA3-207ENST00000536239 SHISA4Q96DD7 197 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 EBF1Q9UH73 591 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 GPR160Q9UJ42 338 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 PCDHA11Q9Y5I1 949 aa5.09□□□□□ -1.59
SKA3-207ENST00000536239 PSPNO60542 156 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 CELA3BP08861 270 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 MCATQ8IVS2 390 aaKnown RBP5.08□□□□□ -1.6
SKA3-207ENST00000536239 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 SIGLEC10Q96LC7 697 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 SETDB2Q96T68 719 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 FAM8A1Q9UBU6 413 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 KCNH3Q9ULD8 1083 aa5.08□□□□□ -1.6
SKA3-207ENST00000536239 OR14I1A6ND48 311 aa5.07□□□□□ -1.6
SKA3-207ENST00000536239 USP17L7P0C7H9 530 aa5.07□□□□□ -1.6
SKA3-207ENST00000536239 PI3P19957 117 aa5.07□□□□□ -1.6
SKA3-207ENST00000536239 MAPK8P45983 427 aa5.07□□□□□ -1.6
SKA3-207ENST00000536239 GALK1P51570 392 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms