RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TDHQ8IZJ6 230 aa15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 PORCNQ9H237 461 aa15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 DBNLQ9UJU6 430 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 RABGAP1Q9Y3P9 1069 aa15.79■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MYO5AQ9Y4I1 1855 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ABCB5Q2M3G0 1257 aa15.78■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CERKLQ49MI3 558 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-207ENST00000535958 C12orf42Q96LP6 360 aa15.78■□□□□ 0.12
TNFRSF1A-207ENST00000535958 EHD4Q9H223 541 aa15.78■□□□□ 0.12
TNFRSF1A-207ENST00000535958 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-207ENST00000535958 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CCND3P30281 292 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MAP2K5Q13163 448 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 CCL14Q16627 93 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 Q3C1V9 767 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 MORN1Q5T089 497 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 GPR153Q6NV75 609 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 TMED8Q6PL24 325 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 ERC1Q8IUD2 1116 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 DEFB123Q8N688 67 aa15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 EDC3Q96F86 508 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-207ENST00000535958 PFASO15067 1338 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 DLL1O00548 723 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 MPHOSPH10O00566 681 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 MSCO60682 206 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 VCAM1P19320 739 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 CNGA1P29973 690 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 MNX1P50219 401 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 ATP2B2Q01814 1243 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 TATDN1Q6P1N9 297 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 PRKAG2Q9UGJ0 569 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 NOP58Q9Y2X3 529 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
TNFRSF1A-207ENST00000535958 SLC15A5A6NIM6 579 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LRIT3Q3SXY7 679 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 AACSQ86V21 672 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 USP6NLQ92738 828 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
TNFRSF1A-207ENST00000535958 MAGEB6P1A0A0J9YX57 407 aa15.74■□□□□ 0.11
TNFRSF1A-207ENST00000535958 TTF1Q15361 905 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-207ENST00000535958 HSP90AB4PQ58FF6 505 aa15.74■□□□□ 0.11
TNFRSF1A-207ENST00000535958 CATSPERGQ6ZRH7 1159 aa15.74■□□□□ 0.11
TNFRSF1A-207ENST00000535958 CRNKL1Q9BZJ0 848 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-207ENST00000535958 RPAP3Q9H6T3 665 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-207ENST00000535958 COL6A1P12109 1028 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 PTPREP23469 700 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 MDM2Q00987 491 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LRRC26Q2I0M4 334 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LHX8Q68G74 356 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 TANGO6Q9C0B7 1094 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 SENP6Q9GZR1 1112 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 DDX20Q9UHI6 824 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 EXOC6BQ9Y2D4 811 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 FRMPD3Q5JV73 1810 aa15.73■□□□□ 0.11
TNFRSF1A-207ENST00000535958 CNMDO75829 334 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LBX2Q6XYB7 198 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 DPP9Q86TI2 863 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 ACER1Q8TDN7 264 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 ANTXR1Q9H6X2 564 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 MCM9Q9NXL9 1143 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 SLC5A4Q9NY91 659 aa15.72■□□□□ 0.11
TNFRSF1A-207ENST00000535958 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 SHMT1P34896 483 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 GRB14Q14449 540 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 CEP85Q6P2H3 762 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 Q7L0L9 218 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 LPAR1Q92633 364 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 BCL11AQ9H165 835 aa15.71■□□□□ 0.11
TNFRSF1A-207ENST00000535958 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 DNM1LO00429 736 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 PLCD1P51178 756 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SEPT2Q15019 361 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SLC9C2Q5TAH2 1124 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 CLASRPQ8N2M8 674 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SH2D4AQ9H788 454 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 FLRT1Q9NZU1 646 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 BTBD7Q9P203 1132 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 STXBP5LQ9Y2K9 1186 aa15.7■□□□□ 0.1
TNFRSF1A-207ENST00000535958 HOXC6P09630 235 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 CYP2C19P33261 490 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 PLS1Q14651 629 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 COG2Q14746 738 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ARRDC4Q8NCT1 418 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 RIOK1Q9BRS2 568 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ARHGEF10LQ9HCE6 1279 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
TNFRSF1A-207ENST00000535958 APBB1O00213 710 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms