RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 MTMR8Q96EF0 704 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 DDX11Q96FC9 970 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 USP28Q96RU2 1077 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 ZC3H12CQ9C0D7 883 aaKnown RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 SWAP70Q9UH65 585 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 SYNPO2Q9UMS6 1093 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 CCDC69A6NI79 296 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 NMT2O60551 498 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 CRKP46108 304 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 KRT40Q6A162 431 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 SRBD1Q8N5C6 995 aaKnown RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 DYNLL2Q96FJ2 89 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 AIFM3Q96NN9 605 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 MYL10Q9BUA6 226 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 MXD3Q9BW11 206 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 MCM9Q9NXL9 1143 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 CCDC196A0A1B0GTZ2 297 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 C6orf229H3BNL8 230 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 SLC3A2P08195 630 aaKnown RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 DPEP1P16444 411 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 CCDC93Q567U6 631 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 CCDC183Q5T5S1 534 aa9.28□□□□□ -0.92
COL21A1-212ENST00000535941 COL11A1P12107 1806 aaPredicted RBP9.28□□□□□ -0.92
COL21A1-212ENST00000535941 MINDY4BA8MYZ0 360 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 PPP6R2O75170 966 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 SOGA3Q5TF21 947 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 SAMD1Q6SPF0 538 aaPredicted RBP9.27□□□□□ -0.92
COL21A1-212ENST00000535941 TEX11Q8IYF3 940 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 TTLL6Q8N841 843 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 C8orf76Q96K31 380 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 ZKSCAN3Q9BRR0 538 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 SPZ1Q9BXG8 430 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 CFAP45Q9UL16 551 aa9.27□□□□□ -0.92
COL21A1-212ENST00000535941 PLEKHA8P1O95397 391 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 PFKFB3Q16875 520 aaPredicted RBP9.27□□□□□ -0.93
COL21A1-212ENST00000535941 IFIT1BQ5T764 474 aaKnown RBP9.27□□□□□ -0.93
COL21A1-212ENST00000535941 MICU3Q86XE3 530 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 WASF1Q92558 559 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 PHKBQ93100 1093 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 MKL1Q969V6 931 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 PDLIM2Q96JY6 352 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 ALG1Q9BT22 464 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 LOXHD1Q8IVV2 1947 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 SSRP1Q08945 709 aaKnown RBP9.27□□□□□ -0.93
COL21A1-212ENST00000535941 AOC3Q16853 763 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 FKBP1CQ5VVH2 108 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 CAVIN1Q6NZI2 390 aaKnown RBP9.27□□□□□ -0.93
COL21A1-212ENST00000535941 IQCA1Q86XH1 822 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 GJB4Q9NTQ9 266 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 R3HCC1Q9Y3T6 440 aaKnown RBP9.27□□□□□ -0.93
COL21A1-212ENST00000535941 WDR81Q562E7 1941 aa9.27□□□□□ -0.93
COL21A1-212ENST00000535941 CYTH3O43739 400 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 ENTPD3O75355 529 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 IARSP41252 1262 aaKnown RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 PRELPP51888 382 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 MAPKAPK5Q8IW41 473 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 TEKT1Q969V4 418 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 PPP1R9BQ96SB3 815 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 UBAC1Q9BSL1 405 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 TTF2Q9UNY4 1162 aaKnown RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 CD2APQ9Y5K6 639 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 RXRAP19793 462 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 SLC39A14Q15043 492 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 MTERF4Q7Z6M4 381 aaKnown RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 FAM184AQ8NB25 1140 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 TMEM47Q9BQJ4 181 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 CLSTN2Q9H4D0 955 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 SCN4AP35499 1836 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 LIG1P18858 919 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 USP5P45974 858 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 ZNF280AP59817 542 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 FAM47AQ5JRC9 791 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 SLC44A5Q8NCS7 719 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 FTOQ9C0B1 505 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL21A1-212ENST00000535941 RIOX1Q9H6W3 641 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 DBNDD1Q9H9R9 158 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 PCDHAC2Q9Y5I4 1007 aa9.26□□□□□ -0.93
COL21A1-212ENST00000535941 CLIC4Q9Y696 253 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms