RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 SMCHD1A6NHR9 2005 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 ANP32CO43423 234 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 ATP2B2Q01814 1243 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 LRRC41Q15345 812 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 CATSPERGQ6ZRH7 1159 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 TEX11Q8IYF3 940 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 ACER1Q8TDN7 264 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 PI4KBQ9UBF8 816 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 HERC5Q9UII4 1024 aaKnown RBP10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 PALD1Q9ULE6 856 aa10.96□□□□□ -0.65
LRTOMT-211ENST00000535883 PIEZO1Q92508 2521 aa10.96□□□□□ -0.66
LRTOMT-211ENST00000535883 KIAA0355O15063 1070 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 ASNSP08243 561 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 IL15P40933 162 aaPredicted RBP10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 FAM47AQ5JRC9 791 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 MAPKAPK5Q8IW41 473 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 ATXN2LQ8WWM7 1075 aaKnown RBP10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 SSH1Q8WYL5 1049 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 PRDM12Q9H4Q4 367 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 TCF20Q9UGU0 1960 aaKnown RBP10.95□□□□□ -0.66
LRTOMT-211ENST00000535883 A0A1B0GUL7 405 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 SEPT4O43236 478 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 MSCO60682 206 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 GH2P01242 217 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 BMP1P13497 986 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 FAAP100Q0VG06 881 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 TFCP2Q12800 502 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 CCDC85BQ15834 202 aaPredicted RBP10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 KIAA1755Q5JYT7 1200 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 WDR78Q5VTH9 848 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 SPTY2D1Q68D10 685 aaPredicted RBP10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 TGFBRAP1Q8WUH2 860 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 C12orf42Q96LP6 360 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 COPRSQ9NQ92 184 aa10.94□□□□□ -0.66
LRTOMT-211ENST00000535883 FLT1P17948 1338 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 ADORA2AP29274 412 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 GUCY1A2P33402 732 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 MCAMP43121 646 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 EVX2Q03828 476 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 RASIP1Q5U651 963 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 OLFML2BQ68BL8 750 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 LBX2Q6XYB7 198 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 FOXP4Q8IVH2 680 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 CCAR1Q8IX12 1150 aaKnown RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 ARRDC4Q8NCT1 418 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 EPHX3Q9H6B9 360 aa10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 AATFQ9NY61 560 aaKnown RBP eCLIP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 SAP30BPQ9UHR5 308 aaKnown RBP10.93□□□□□ -0.66
LRTOMT-211ENST00000535883 SYNGAP1Q96PV0 1343 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 CDK5RAP2Q96SN8 1893 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 MAP4K4O95819 1239 aaPredicted RBP10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 CLTBP09497 229 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 VCAM1P19320 739 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 PPP4CP60510 307 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 DYNLL1P63167 89 aaKnown RBP10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 TFF2Q03403 129 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
LRTOMT-211ENST00000535883 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 PTPRCP08575 1304 aa10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 ZNF521Q96K83 1311 aa10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 KBTBD13C9JR72 458 aa10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 PGK1P00558 417 aa10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 MRPS5P82675 430 aaKnown RBP10.91□□□□□ -0.66
LRTOMT-211ENST00000535883 TMEM240Q5SV17 173 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms