RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
CHD4-204ENST00000535810 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
CHD4-204ENST00000535810 MYH7P12883 1935 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 PRKAB2O43741 272 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 GNRH1P01148 92 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 GH2P01242 217 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 SHMT1P34896 483 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 BACE1P56817 501 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 GABPAQ06546 454 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 KIF22Q14807 665 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 OTUD7AQ8TE49 926 aaPredicted RBP10.67□□□□□ -0.7
CHD4-204ENST00000535810 SMCR8Q8TEV9 937 aaPredicted RBP10.67□□□□□ -0.7
CHD4-204ENST00000535810 TRIM47Q96LD4 638 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 MCM9Q9NXL9 1143 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 PTCH2Q9Y6C5 1203 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 COL6A3P12111 3177 aa10.67□□□□□ -0.7
CHD4-204ENST00000535810 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 POLR3DP05423 398 aaPredicted RBP10.66□□□□□ -0.7
CHD4-204ENST00000535810 CYP2D6P10635 497 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 PSMC4P43686 418 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 HDAC1Q13547 482 aaPredicted RBP10.66□□□□□ -0.7
CHD4-204ENST00000535810 ZSCAN25Q6NSZ9 544 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 KBTBD3Q8NAB2 608 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 PUS7LQ9H0K6 701 aaKnown RBP10.66□□□□□ -0.7
CHD4-204ENST00000535810 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
CHD4-204ENST00000535810 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 TRIOBPQ9H2D6 2365 aa10.66□□□□□ -0.7
CHD4-204ENST00000535810 TTC41PQ6P2S7 1318 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
CHD4-204ENST00000535810 OSBPP22059 807 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 TIE1P35590 1138 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 PRMT2P55345 433 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 FCGRTP55899 365 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 PABPC4Q13310 644 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHD4-204ENST00000535810 FAM110CQ1W6H9 321 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 ABCB5Q2M3G0 1257 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.7
CHD4-204ENST00000535810 SLC9C1Q4G0N8 1177 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 SLC44A5Q8NCS7 719 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 PI4K2BQ8TCG2 481 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 ZNF333Q96JL9 665 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 ASCC2Q9H1I8 757 aaPredicted RBP10.65□□□□□ -0.7
CHD4-204ENST00000535810 ATP8A2Q9NTI2 1148 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 TMOD4Q9NZQ9 345 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 SRRDQ9UH36 339 aa10.65□□□□□ -0.7
CHD4-204ENST00000535810 MYPNQ86TC9 1320 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 C19orf81C9J6K1 198 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 ERC2O15083 957 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 MX1P20591 662 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 GUCY1A2P33402 732 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 AAMPQ13685 434 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 RAB3GAP1Q15042 981 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 FEZ1Q99689 392 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 SLC4A4Q9Y6R1 1079 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 CEP290O15078 2479 aa10.64□□□□□ -0.71
CHD4-204ENST00000535810 BAZ2AQ9UIF9 1905 aaKnown RBP10.64□□□□□ -0.71
CHD4-204ENST00000535810 CYP2D7A0A087X1C5 515 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 SMIM22K7EJ46 135 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 RNF113AO15541 343 aaKnown RBP10.63□□□□□ -0.71
CHD4-204ENST00000535810 GLRX3O76003 335 aaKnown RBP10.63□□□□□ -0.71
CHD4-204ENST00000535810 HOXD10P28358 340 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 HOXA7P31268 230 aaPredicted RBP10.63□□□□□ -0.71
CHD4-204ENST00000535810 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
CHD4-204ENST00000535810 IRX3P78415 501 aaPredicted RBP10.63□□□□□ -0.71
CHD4-204ENST00000535810 PRKCZQ05513 592 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 ANKRD45Q5TZF3 282 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 C12orf60Q5U649 245 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 SH3TC2Q8TF17 1288 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 APPBP2Q92624 585 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 OSBP2Q969R2 916 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 DYNLL2Q96FJ2 89 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
CHD4-204ENST00000535810 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 SWAP70Q9UH65 585 aa10.63□□□□□ -0.71
CHD4-204ENST00000535810 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
CHD4-204ENST00000535810 MGAMO43451 1857 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 USP17L21D6R901 530 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 TNPO2O14787 897 aaKnown RBP10.62□□□□□ -0.71
CHD4-204ENST00000535810 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
CHD4-204ENST00000535810 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
CHD4-204ENST00000535810 SEPT2Q15019 361 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
CHD4-204ENST00000535810 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 RAET1EQ8TD07 263 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 ACER1Q8TDN7 264 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 DDRGK1Q96HY6 314 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 KIAA1683Q9H0B3 1180 aa10.62□□□□□ -0.71
CHD4-204ENST00000535810 LAMA3Q16787 3333 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms