RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 GTF3C2Q8WUA4 911 aaPredicted RBP24.99■■□□□ 1.59
LTBR-205ENST00000535739 SOCS4Q8WXH5 440 aa24.99■■□□□ 1.59
LTBR-205ENST00000535739 DNAJC2Q99543 621 aaKnown RBP24.99■■□□□ 1.59
LTBR-205ENST00000535739 ZNF532Q9HCE3 1301 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 GOLIM4O00461 696 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 IFIT2P09913 472 aaKnown RBP24.98■■□□□ 1.59
LTBR-205ENST00000535739 EVX2Q03828 476 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 PDE3AQ14432 1141 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 GPR142Q7Z601 462 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 NECAB2Q7Z6G3 386 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 CCAR1Q8IX12 1150 aaKnown RBP24.98■■□□□ 1.59
LTBR-205ENST00000535739 PRO3102Q9H379 93 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 CABP5Q9NP86 173 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 ZBTB40Q9NUA8 1239 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 DDX19BQ9UMR2 479 aa24.98■■□□□ 1.59
LTBR-205ENST00000535739 USP17L15C9J2P7 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L13C9JLJ4 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L11C9JVI0 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L18D6R9N7 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L22D6RA61 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L17D6RBQ6 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L19D6RCP7 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L20D6RJB6 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 HMMRO75330 724 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 XRCC5P13010 732 aaKnown RBP24.97■■□□□ 1.59
LTBR-205ENST00000535739 PRKAR2AP13861 404 aaKnown RBP24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP14P54578 494 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP17L24Q0WX57 530 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.97■■□□□ 1.59
LTBR-205ENST00000535739 USP6NLQ92738 828 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 EDC3Q96F86 508 aaKnown RBP24.97■■□□□ 1.59
LTBR-205ENST00000535739 CRNKL1Q9BZJ0 848 aaKnown RBP24.97■■□□□ 1.59
LTBR-205ENST00000535739 KIAA1683Q9H0B3 1180 aa24.97■■□□□ 1.59
LTBR-205ENST00000535739 CNMDO75829 334 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 GUCY1A2P33402 732 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 MAP3K21Q5TCX8 1036 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 CATSPERGQ6ZRH7 1159 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 PLEKHH3Q7Z736 793 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 ANKLE1Q8NAG6 615 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 MCM9Q9NXL9 1143 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 RABGAP1Q9Y3P9 1069 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 MYH8P13535 1937 aa24.96■■□□□ 1.59
LTBR-205ENST00000535739 BAZ2AQ9UIF9 1905 aaKnown RBP24.95■■□□□ 1.58
LTBR-205ENST00000535739 TCRBV5S4A2TA0A5A2 114 aa24.95■■□□□ 1.58
LTBR-205ENST00000535739 VCAM1P19320 739 aa24.95■■□□□ 1.58
LTBR-205ENST00000535739 GABPAQ06546 454 aa24.95■■□□□ 1.58
LTBR-205ENST00000535739 MORN1Q5T089 497 aa24.95■■□□□ 1.58
LTBR-205ENST00000535739 SDR42E1Q8WUS8 393 aa24.95■■□□□ 1.58
LTBR-205ENST00000535739 ZKSCAN1P17029 563 aaPredicted RBP24.94■■□□□ 1.58
LTBR-205ENST00000535739 MNX1P50219 401 aaPredicted RBP24.94■■□□□ 1.58
LTBR-205ENST00000535739 SEPT2Q15019 361 aa24.94■■□□□ 1.58
LTBR-205ENST00000535739 CCL14Q16627 93 aa24.94■■□□□ 1.58
LTBR-205ENST00000535739 LCORLQ8N3X6 602 aa24.94■■□□□ 1.58
LTBR-205ENST00000535739 RAB11FIP3O75154 756 aa24.93■■□□□ 1.58
LTBR-205ENST00000535739 RGS2P41220 211 aa24.93■■□□□ 1.58
LTBR-205ENST00000535739 CACNB2Q08289 660 aaPredicted RBP24.93■■□□□ 1.58
LTBR-205ENST00000535739 SLFNL1Q499Z3 407 aa24.93■■□□□ 1.58
LTBR-205ENST00000535739 TRMT44Q8IYL2 757 aaKnown RBP24.93■■□□□ 1.58
LTBR-205ENST00000535739 CWC22Q9HCG8 908 aaKnown RBP24.93■■□□□ 1.58
LTBR-205ENST00000535739 DCP1AQ9NPI6 582 aaPredicted RBP24.93■■□□□ 1.58
LTBR-205ENST00000535739 OGDHLQ9ULD0 1010 aa24.93■■□□□ 1.58
LTBR-205ENST00000535739 MYH7P12883 1935 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 LAMA3Q16787 3333 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 CYP2D6P10635 497 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 NBPF3Q9H094 633 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 BOLA2Q9H3K6 86 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 RPAP3Q9H6T3 665 aaPredicted RBP24.92■■□□□ 1.58
LTBR-205ENST00000535739 ARMT1Q9H993 441 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 DNAH12Q6ZR08 3092 aa24.92■■□□□ 1.58
LTBR-205ENST00000535739 MPHOSPH10O00566 681 aaKnown RBP24.91■■□□□ 1.58
LTBR-205ENST00000535739 CCNA1P78396 465 aa24.91■■□□□ 1.58
LTBR-205ENST00000535739 WDR78Q5VTH9 848 aa24.91■■□□□ 1.58
LTBR-205ENST00000535739 APBA2Q99767 749 aa24.91■■□□□ 1.58
LTBR-205ENST00000535739 PAG1Q9NWQ8 432 aa24.91■■□□□ 1.58
LTBR-205ENST00000535739 BTBD7Q9P203 1132 aa24.91■■□□□ 1.58
LTBR-205ENST00000535739 A0A1W2PRG0 241 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 CCND3P30281 292 aaPredicted RBP24.9■■□□□ 1.58
LTBR-205ENST00000535739 MAP2K5Q13163 448 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 LBX2Q6XYB7 198 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 C7orf61Q8IZ16 206 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 SLC44A5Q8NCS7 719 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 C11orf49Q9H6J7 331 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 STAP2Q9UGK3 403 aa24.9■■□□□ 1.58
LTBR-205ENST00000535739 SPDYE16A6NNV3 312 aaPredicted RBP24.89■■□□□ 1.58
LTBR-205ENST00000535739 PRKAB2O43741 272 aa24.89■■□□□ 1.58
LTBR-205ENST00000535739 DYNLL2Q96FJ2 89 aa24.89■■□□□ 1.58
LTBR-205ENST00000535739 RCAN3Q9UKA8 241 aa24.89■■□□□ 1.58
LTBR-205ENST00000535739 FRMPD3Q5JV73 1810 aa24.89■■□□□ 1.57
LTBR-205ENST00000535739 RLFQ13129 1914 aa24.88■■□□□ 1.57
LTBR-205ENST00000535739 GLRX3O76003 335 aaKnown RBP24.88■■□□□ 1.57
LTBR-205ENST00000535739 MBD4O95243 580 aa24.88■■□□□ 1.57
LTBR-205ENST00000535739 ATP5JP18859 108 aa24.88■■□□□ 1.57
LTBR-205ENST00000535739 ADD2P35612 726 aa24.88■■□□□ 1.57
LTBR-205ENST00000535739 CHGBP05060 677 aa24.87■■□□□ 1.57
LTBR-205ENST00000535739 PTPREP23469 700 aa24.87■■□□□ 1.57
LTBR-205ENST00000535739 LHX8Q68G74 356 aa24.87■■□□□ 1.57
LTBR-205ENST00000535739 HAUS7Q99871 368 aa24.87■■□□□ 1.57
LTBR-205ENST00000535739 CHMP4BQ9H444 224 aaKnown RBP24.87■■□□□ 1.57
LTBR-205ENST00000535739 FLRT1Q9NZU1 646 aa24.87■■□□□ 1.57
LTBR-205ENST00000535739 ZMYND8Q9ULU4 1186 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms