RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 ALG1Q9BT22 464 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 SLC26A6Q9BXS9 759 aa24.39■■□□□ 1.5
PDXDC1-205ENST00000535621 MYH8P13535 1937 aa24.39■■□□□ 1.49
PDXDC1-205ENST00000535621 EIF6P56537 245 aaKnown RBP24.39■■□□□ 1.49
PDXDC1-205ENST00000535621 GJB4Q9NTQ9 266 aa24.39■■□□□ 1.49
PDXDC1-205ENST00000535621 MBD3O95983 291 aa24.38■■□□□ 1.49
PDXDC1-205ENST00000535621 GABPAQ06546 454 aa24.38■■□□□ 1.49
PDXDC1-205ENST00000535621 CSPP1Q1MSJ5 1256 aa24.38■■□□□ 1.49
PDXDC1-205ENST00000535621 CCDC178Q5BJE1 867 aa24.38■■□□□ 1.49
PDXDC1-205ENST00000535621 CRACR2BQ8N4Y2 399 aaPredicted RBP24.38■■□□□ 1.49
PDXDC1-205ENST00000535621 HDAC9Q9UKV0 1011 aa24.38■■□□□ 1.49
PDXDC1-205ENST00000535621 DLGAP5Q15398 846 aa24.37■■□□□ 1.49
PDXDC1-205ENST00000535621 CMTR1Q8N1G2 835 aaKnown RBP24.37■■□□□ 1.49
PDXDC1-205ENST00000535621 MYH15Q9Y2K3 1946 aa24.37■■□□□ 1.49
PDXDC1-205ENST00000535621 UBE2Q2LH0YL09 131 aa24.37■■□□□ 1.49
PDXDC1-205ENST00000535621 SCAF8Q9UPN6 1271 aaKnown RBP24.37■■□□□ 1.49
PDXDC1-205ENST00000535621 NBPF9Q3BBW0 867 aa24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 RBM26Q5T8P6 1007 aaKnown RBP24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 SH3BP5LQ7L8J4 393 aa24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 TRIM22Q8IYM9 498 aa24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 IDI2Q9BXS1 227 aa24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 SCAND2PQ9GZW5 306 aaPredicted RBP24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 RBM28Q9NW13 759 aaKnown RBP24.36■■□□□ 1.49
PDXDC1-205ENST00000535621 DDTLA6NHG4 134 aaPredicted RBP24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 FUT2Q10981 343 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 CCDC82Q8N4S0 544 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 NEDD1Q8NHV4 660 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 TFIP11Q9UBB9 837 aaKnown RBP24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 ELP1O95163 1332 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 DEKP35659 375 aaKnown RBP24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 UBE2HP62256 183 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 CAVIN1Q6NZI2 390 aaKnown RBP24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 SAMD7Q7Z3H4 446 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 MICALL2Q8IY33 904 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 WASF1Q92558 559 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 KAT14Q9H8E8 782 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 MYOZ2Q9NPC6 264 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 RNF181Q9P0P0 153 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 SERPINB13Q9UIV8 391 aa24.35■■□□□ 1.49
PDXDC1-205ENST00000535621 TCP10L2B9ZVM9 353 aa24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 SOCS7O14512 581 aa24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 GUCY1A2P33402 732 aa24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 ZNF70Q9UC06 446 aaPredicted RBP24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 FAM196BA6NMK8 535 aa24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 NPM3O75607 178 aaKnown RBP24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 DEXIO95424 95 aa24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 KRT40Q6A162 431 aa24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 RNF26Q9BY78 433 aaPredicted RBP24.34■■□□□ 1.49
PDXDC1-205ENST00000535621 ASTN2O75129 1339 aaPredicted RBP24.33■■□□□ 1.49
PDXDC1-205ENST00000535621 WNT10BO00744 389 aa24.33■■□□□ 1.49
PDXDC1-205ENST00000535621 PLEKHA8P1O95397 391 aa24.33■■□□□ 1.49
PDXDC1-205ENST00000535621 PNMA1Q8ND90 353 aa24.33■■□□□ 1.49
PDXDC1-205ENST00000535621 ZBED3Q96IU2 234 aaPredicted RBP24.33■■□□□ 1.49
PDXDC1-205ENST00000535621 TMTC3Q6ZXV5 915 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 CTCFLQ8NI51 663 aaPredicted RBP24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 LEO1Q8WVC0 666 aaPredicted RBP24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 VEZTQ9HBM0 779 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 SWAP70Q9UH65 585 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 CNOT7Q9UIV1 285 aaKnown RBP24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 CFAP45Q9UL16 551 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 STX8Q9UNK0 236 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 HLA-DOAP06340 250 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 ZNF280AP59817 542 aaPredicted RBP24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 KIF23Q02241 960 aaPredicted RBP24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 GPR162Q16538 588 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 SPDYE2Q495Y8 402 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 TBC1D10BQ4KMP7 808 aaPredicted RBP24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 CDAN1Q8IWY9 1227 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 SPATA32Q96LK8 384 aa24.32■■□□□ 1.48
PDXDC1-205ENST00000535621 MYH6P13533 1939 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 PLIN4Q96Q06 1357 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 RPS12P25398 132 aaKnown RBP24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 C9orf131Q5VYM1 1079 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 ATL3Q6DD88 541 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 ZSCAN29Q8IWY8 852 aaPredicted RBP24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 MAP3K14Q99558 947 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 TMEM47Q9BQJ4 181 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 EHD4Q9H223 541 aa24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 DHX36Q9H2U1 1008 aaKnown RBP24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 RBM27Q9P2N5 1060 aaKnown RBP24.31■■□□□ 1.48
PDXDC1-205ENST00000535621 KIF28PB7ZC32 967 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 NOVP48745 357 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 TRIM29Q14134 588 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 BRAPQ7Z569 592 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 MTMR14Q8NCE2 650 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 DNAJC18Q9H819 358 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 TMEM63CQ9P1W3 806 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 CNTNAP1P78357 1384 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 PRPF3O43395 683 aaKnown RBP24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 CEP95Q96GE4 821 aa24.3■■□□□ 1.48
PDXDC1-205ENST00000535621 DDNO94850 711 aaPredicted RBP24.29■■□□□ 1.48
PDXDC1-205ENST00000535621 KIF5BP33176 963 aa24.29■■□□□ 1.48
PDXDC1-205ENST00000535621 SHMT1P34896 483 aa24.29■■□□□ 1.48
PDXDC1-205ENST00000535621 SRBD1Q8N5C6 995 aaKnown RBP24.29■■□□□ 1.48
PDXDC1-205ENST00000535621 ZNF396Q96N95 335 aaPredicted RBP24.29■■□□□ 1.48
PDXDC1-205ENST00000535621 PKN1Q16512 942 aa24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 DPF2Q92785 391 aa24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 USP28Q96RU2 1077 aa24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 AKAP17AQ02040 695 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms