RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 HIRAP54198 1017 aaPredicted RBP26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 PPP2R5BQ15173 497 aa26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 NUP133Q8WUM0 1156 aa26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 PGAP2Q9UHJ9 254 aa26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 MYH4Q9Y623 1939 aa26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 PITPNM2Q9BZ72 1349 aa26.77■■□□□ 1.88
RBFOX1-206ENST00000535565 DCAF8L1A6NGE4 600 aa26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 CDKL5O76039 1030 aa26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 SLURP2P0DP57 97 aa26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 HMGN5P82970 282 aaKnown RBP26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 RTN1Q16799 776 aa26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 CCDC144CPQ8IYA2 1237 aa26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 NSUN7Q8NE18 718 aaKnown RBP26.76■■□□□ 1.87
RBFOX1-206ENST00000535565 NUCB2P80303 420 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 PNMA1Q8ND90 353 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 HOOK2Q96ED9 719 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 MTMR4Q9NYA4 1195 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 SCAF8Q9UPN6 1271 aaKnown RBP26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 KIF3AQ9Y496 699 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 PPP2R3BQ9Y5P8 575 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 POLR2AP24928 1970 aaKnown RBP26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 IGKV6D-41A0A0C4DH26 115 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 ABCB5Q2M3G0 1257 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 TMEM179Q6ZVK1 233 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 CDAN1Q8IWY9 1227 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 FANCBQ8NB91 859 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 SMARCC2Q8TAQ2 1214 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 TEPSINQ96N21 525 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 WDR90Q96KV7 1748 aa26.75■■□□□ 1.87
RBFOX1-206ENST00000535565 PTPDC1A2A3K4 754 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 IQCA1LA6NCM1 817 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 CTDNEP1O95476 244 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 TOP1P11387 765 aaKnown RBP26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 NOVP48745 357 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 TROAPQ12815 778 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 USP50Q70EL3 339 aaPredicted RBP26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 TMEM47Q9BQJ4 181 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 CABP5Q9NP86 173 aa26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 RBM28Q9NW13 759 aaKnown RBP26.74■■□□□ 1.87
RBFOX1-206ENST00000535565 JAK2O60674 1132 aa26.73■■□□□ 1.87
RBFOX1-206ENST00000535565 TTLL1O95922 423 aa26.73■■□□□ 1.87
RBFOX1-206ENST00000535565 CDC27P30260 824 aa26.73■■□□□ 1.87
RBFOX1-206ENST00000535565 ADD1P35611 737 aaKnown RBP26.73■■□□□ 1.87
RBFOX1-206ENST00000535565 FAM184AQ8NB25 1140 aa26.73■■□□□ 1.87
RBFOX1-206ENST00000535565 CTCFLQ8NI51 663 aaPredicted RBP26.73■■□□□ 1.87
RBFOX1-206ENST00000535565 PDCP20941 246 aa26.72■■□□□ 1.87
RBFOX1-206ENST00000535565 EPHX2P34913 555 aa26.72■■□□□ 1.87
RBFOX1-206ENST00000535565 MAP3K10Q02779 954 aa26.72■■□□□ 1.87
RBFOX1-206ENST00000535565 MIGA2Q7L4E1 593 aa26.72■■□□□ 1.87
RBFOX1-206ENST00000535565 MAP3K14Q99558 947 aa26.72■■□□□ 1.87
RBFOX1-206ENST00000535565 GDF11O95390 407 aa26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 PDIA4P13667 645 aaKnown RBP26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 DCPSQ96C86 337 aaKnown RBP26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 KANSL2Q9H9L4 492 aa26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 FAM217BQ9NTX9 383 aaPredicted RBP26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 ATAD5Q96QE3 1844 aa26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 KIF5BP33176 963 aa26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 DCAF15Q66K64 600 aa26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 DDX11Q96FC9 970 aa26.71■■□□□ 1.87
RBFOX1-206ENST00000535565 CLIP2Q9UDT6 1046 aa26.7■■□□□ 1.86
RBFOX1-206ENST00000535565 MYH6P13533 1939 aa26.69■■□□□ 1.86
RBFOX1-206ENST00000535565 DTNBO60941 627 aa26.69■■□□□ 1.86
RBFOX1-206ENST00000535565 GH2P01242 217 aa26.69■■□□□ 1.86
RBFOX1-206ENST00000535565 IFNAR1P17181 557 aa26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 RAB3GAP1Q15042 981 aa26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 NTRK3Q16288 839 aa26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 NBPF12Q5TAG4 269 aaPredicted RBP26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 LARP1BQ659C4 914 aaKnown RBP26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 SULF1Q8IWU6 871 aa26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 ZC3H15Q8WU90 426 aaKnown RBP26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 NYAP2Q9P242 653 aa26.68■■□□□ 1.86
RBFOX1-206ENST00000535565 SYT1P21579 422 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 ATP2B2Q01814 1243 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 ICA1Q05084 483 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 SEPT2Q15019 361 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 CLEC10AQ8IUN9 316 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 WDR33Q9C0J8 1336 aaKnown RBP26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 STX6O43752 255 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 CAP2P40123 477 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 SSRP1Q08945 709 aaKnown RBP26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 RRP1BQ14684 758 aaKnown RBP26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 GRM4Q14833 912 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 TRIM22Q8IYM9 498 aa26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 TAF1DQ9H5J8 278 aaPredicted RBP26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 ORC3Q9UBD5 711 aaPredicted RBP26.67■■□□□ 1.86
RBFOX1-206ENST00000535565 GNAQP50148 359 aa26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 PKP1Q13835 747 aa26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 SHROOM1Q2M3G4 852 aaPredicted RBP26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 SUPT20HL1Q3ZLR7 823 aa26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 PNMA8AQ86V59 439 aaPredicted RBP26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 LRRC47Q8N1G4 583 aaKnown RBP26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 ZBTB21Q9ULJ3 1066 aa26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 STK36Q9NRP7 1315 aa26.66■■□□□ 1.86
RBFOX1-206ENST00000535565 EEF2P13639 858 aaKnown RBP26.65■■□□□ 1.86
RBFOX1-206ENST00000535565 GUCY1A2P33402 732 aa26.65■■□□□ 1.86
RBFOX1-206ENST00000535565 TMTC3Q6ZXV5 915 aa26.65■■□□□ 1.86
RBFOX1-206ENST00000535565 PHKBQ93100 1093 aa26.65■■□□□ 1.86
RBFOX1-206ENST00000535565 ZNF341Q9BYN7 854 aa26.65■■□□□ 1.86
RBFOX1-206ENST00000535565 MTMR7Q9Y216 660 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms