RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 TNKS2Q9H2K2 1166 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 PODXL2Q9NZ53 605 aa8.55□□□□□ -1.04
PRKDC-205ENST00000535375 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
PRKDC-205ENST00000535375 IRAK1P51617 712 aa8.54□□□□□ -1.04
PRKDC-205ENST00000535375 CLCN7P51798 805 aa8.54□□□□□ -1.04
PRKDC-205ENST00000535375 MCTP1Q6DN14 999 aa8.54□□□□□ -1.04
PRKDC-205ENST00000535375 C22orf34Q6ZV56 151 aa8.54□□□□□ -1.04
PRKDC-205ENST00000535375 SPACA3Q8IXA5 215 aa8.54□□□□□ -1.04
PRKDC-205ENST00000535375 REXO1Q8N1G1 1221 aaKnown RBP8.54□□□□□ -1.04
PRKDC-205ENST00000535375 EAF1Q96JC9 268 aaPredicted RBP8.54□□□□□ -1.04
PRKDC-205ENST00000535375 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
PRKDC-205ENST00000535375 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
PRKDC-205ENST00000535375 ATE1O95260 518 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 ZNF865P0CJ78 1059 aaPredicted RBP8.53□□□□□ -1.04
PRKDC-205ENST00000535375 PLCL1Q15111 1095 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 NKPD1Q17RQ9 610 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 ZNF574Q6ZN55 896 aaPredicted RBP8.53□□□□□ -1.04
PRKDC-205ENST00000535375 SPRED2Q7Z698 418 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 SLITRK4Q8IW52 837 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 ABI1Q8IZP0 508 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 DNAJB8Q8NHS0 232 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 GMIPQ9P107 970 aa8.53□□□□□ -1.04
PRKDC-205ENST00000535375 PRR33A8MZF0 331 aa8.52□□□□□ -1.05
PRKDC-205ENST00000535375 CD8BP10966 210 aa8.52□□□□□ -1.05
PRKDC-205ENST00000535375 RAG1P15918 1043 aa8.52□□□□□ -1.05
PRKDC-205ENST00000535375 GBP1P32455 592 aa8.52□□□□□ -1.05
PRKDC-205ENST00000535375 IKZF1Q13422 519 aa8.52□□□□□ -1.05
PRKDC-205ENST00000535375 ANGEL2Q5VTE6 544 aaKnown RBP8.52□□□□□ -1.05
PRKDC-205ENST00000535375 SLC22A31A6NKX4 558 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 CD96P40200 585 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 RACK1P63244 317 aaKnown RBP8.51□□□□□ -1.05
PRKDC-205ENST00000535375 HDLBPQ00341 1268 aaKnown RBP8.51□□□□□ -1.05
PRKDC-205ENST00000535375 CLCQ05315 142 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 LRRFIP1Q32MZ4 808 aaKnown RBP8.51□□□□□ -1.05
PRKDC-205ENST00000535375 ARSHQ5FYA8 562 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 BAHD1Q8TBE0 780 aaPredicted RBP8.51□□□□□ -1.05
PRKDC-205ENST00000535375 HSPA12BQ96MM6 686 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 KIF2CQ99661 725 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 KCNH3Q9ULD8 1083 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 CAPN6Q9Y6Q1 641 aa8.51□□□□□ -1.05
PRKDC-205ENST00000535375 DNAJA2O60884 412 aa8.5□□□□□ -1.05
PRKDC-205ENST00000535375 NFXL1Q6ZNB6 911 aa8.5□□□□□ -1.05
PRKDC-205ENST00000535375 METTL16Q86W50 562 aaKnown RBP8.5□□□□□ -1.05
PRKDC-205ENST00000535375 PIWIL2Q8TC59 973 aaKnown RBP8.5□□□□□ -1.05
PRKDC-205ENST00000535375 PPP1R13LQ8WUF5 828 aa8.5□□□□□ -1.05
PRKDC-205ENST00000535375 COL17A1Q9UMD9 1497 aaPredicted RBP8.5□□□□□ -1.05
PRKDC-205ENST00000535375 H3BS24 57 aa8.49□□□□□ -1.05
PRKDC-205ENST00000535375 RGS13O14921 159 aa8.49□□□□□ -1.05
PRKDC-205ENST00000535375 PI4K2BQ8TCG2 481 aa8.49□□□□□ -1.05
PRKDC-205ENST00000535375 FERD3LQ96RJ6 166 aa8.49□□□□□ -1.05
PRKDC-205ENST00000535375 ZSWIM5Q9P217 1185 aa8.49□□□□□ -1.05
PRKDC-205ENST00000535375 PITPNM2Q9BZ72 1349 aa8.49□□□□□ -1.05
PRKDC-205ENST00000535375 FUT4P22083 530 aa8.48□□□□□ -1.05
PRKDC-205ENST00000535375 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
PRKDC-205ENST00000535375 OVOS1Q6IE37 1185 aa8.48□□□□□ -1.05
PRKDC-205ENST00000535375 RNF141Q8WVD5 230 aa8.48□□□□□ -1.05
PRKDC-205ENST00000535375 UBE2FQ969M7 185 aa8.48□□□□□ -1.05
PRKDC-205ENST00000535375 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
PRKDC-205ENST00000535375 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
PRKDC-205ENST00000535375 IMPDH2P12268 514 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
PRKDC-205ENST00000535375 ZP2Q05996 745 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 TNK2Q07912 1038 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 PAK2Q13177 524 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 THAP5Q7Z6K1 395 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 TMEM40Q8WWA1 233 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 ATG4CQ96DT6 458 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 SPATA32Q96LK8 384 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 ASPNQ9BXN1 380 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 TRIT1Q9H3H1 467 aaKnown RBP8.47□□□□□ -1.05
PRKDC-205ENST00000535375 ATP13A1Q9HD20 1204 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 ADGRE2Q9UHX3 823 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 ST14Q9Y5Y6 855 aa8.47□□□□□ -1.05
PRKDC-205ENST00000535375 PAX4O43316 350 aa8.46□□□□□ -1.06
PRKDC-205ENST00000535375 ZNF792Q3KQV3 632 aa8.46□□□□□ -1.06
PRKDC-205ENST00000535375 CDCP2Q5VXM1 449 aa8.46□□□□□ -1.06
PRKDC-205ENST00000535375 NLRC3Q7RTR2 1065 aa8.46□□□□□ -1.06
PRKDC-205ENST00000535375 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKDC-205ENST00000535375 CNNM2Q9H8M5 875 aa8.46□□□□□ -1.06
PRKDC-205ENST00000535375 SEMA3GQ9NS98 782 aa8.46□□□□□ -1.06
PRKDC-205ENST00000535375 RNF4P78317 190 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 RAD51AP2Q09MP3 1159 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 SLC23A3Q6PIS1 610 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 WFDC3Q8IUB2 231 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 CCSER2Q9H7U1 834 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 GPATCH2Q9NW75 528 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 LMCD1Q9NZU5 365 aa8.45□□□□□ -1.06
PRKDC-205ENST00000535375 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
PRKDC-205ENST00000535375 CCNFP41002 786 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 COL9A2Q14055 689 aaPredicted RBP8.44□□□□□ -1.06
PRKDC-205ENST00000535375 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 GPRASP2Q96D09 838 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 Q96M66 194 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 TGIF2Q9GZN2 237 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 ASCC2Q9H1I8 757 aaPredicted RBP8.44□□□□□ -1.06
PRKDC-205ENST00000535375 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 CARS2Q9HA77 564 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms