RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 CCDC84Q86UT8 332 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-214ENST00000535222 TMEM199Q8N511 208 aa9.59□□□□□ -0.87
CPSF7-214ENST00000535222 NPLOC4Q8TAT6 608 aa9.59□□□□□ -0.87
CPSF7-214ENST00000535222 IRF2BPLQ9H1B7 796 aa9.59□□□□□ -0.87
CPSF7-214ENST00000535222 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
CPSF7-214ENST00000535222 LMCD1Q9NZU5 365 aa9.59□□□□□ -0.87
CPSF7-214ENST00000535222 A0A1W2PQ45 241 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 A0A1W2PQY0 241 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 LPXNO60711 386 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 GLRX3O76003 335 aaKnown RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 DDX58O95786 925 aaKnown RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 CDK7P50613 346 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 KRT40Q6A162 431 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 OSBPL5Q9H0X9 879 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 MTIF3Q9H2K0 278 aaKnown RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.58□□□□□ -0.888e-6■■□□□ 11.4
CPSF7-214ENST00000535222 IL23AQ9NPF7 189 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 MAP3K2Q9Y2U5 619 aa9.58□□□□□ -0.88
CPSF7-214ENST00000535222 MAP1BP46821 2468 aaKnown RBP9.58□□□□□ -0.88
CPSF7-214ENST00000535222 USP24Q9UPU5 2620 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 FGBP02675 491 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 ACRP10323 421 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 MYOGP15173 224 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 RABGGTBP53611 331 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 IRX3P78415 501 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-214ENST00000535222 LMOD3Q0VAK6 560 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 IFIT5Q13325 482 aaKnown RBP9.57□□□□□ -0.88
CPSF7-214ENST00000535222 PUS10Q3MIT2 529 aaKnown RBP9.57□□□□□ -0.88
CPSF7-214ENST00000535222 TSEN34Q9BSV6 310 aaKnown RBP9.57□□□□□ -0.88
CPSF7-214ENST00000535222 WDR18Q9BV38 432 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 UBE2ZQ9H832 354 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-214ENST00000535222 RABGAP1Q9Y3P9 1069 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 RFX7Q2KHR2 1363 aa9.57□□□□□ -0.88
CPSF7-214ENST00000535222 PLXNA3P51805 1871 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 MED19A0JLT2 244 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-214ENST00000535222 PI4KAP2A4QPH2 592 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 DDTLA6NHG4 134 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-214ENST00000535222 CNMDO75829 334 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 SLURP2P0DP57 97 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 IL9P15248 144 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 BACE1P56817 501 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 FOXO4P98177 505 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 CWF19L2Q2TBE0 894 aaKnown RBP9.56□□□□□ -0.88
CPSF7-214ENST00000535222 HERC4Q5GLZ8 1057 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-214ENST00000535222 FAM47AQ5JRC9 791 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 SAMD1Q6SPF0 538 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-214ENST00000535222 LDHAL6AQ6ZMR3 332 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 ASCL5Q7RTU5 278 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 PI4KAP1Q8N8J0 262 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 PRKAG3Q9UGI9 489 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 CEP250Q9BV73 2442 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 SMCHD1A6NHR9 2005 aa9.56□□□□□ -0.88
CPSF7-214ENST00000535222 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 TMPOP42166 694 aaKnown RBP9.55□□□□□ -0.88
CPSF7-214ENST00000535222 RGS3P49796 1198 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 RNF180Q86T96 592 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 CCAR1Q8IX12 1150 aaKnown RBP9.55□□□□□ -0.88
CPSF7-214ENST00000535222 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 USP40Q9NVE5 1235 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 NRBP1Q9UHY1 535 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 UNC79Q9P2D8 2635 aa9.55□□□□□ -0.88
CPSF7-214ENST00000535222 DOCK2Q92608 1830 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 ROBO3Q96MS0 1386 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 C19orf81C9J6K1 198 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 CAP2P40123 477 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 CCNA1P78396 465 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 ZP2Q05996 745 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 NEXNQ0ZGT2 675 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 CHAF1AQ13111 956 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-214ENST00000535222 GRB10Q13322 594 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 KCTD2Q14681 263 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 ANO1Q5XXA6 986 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 CCSAPQ6IQ19 270 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-214ENST00000535222 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-214ENST00000535222 LBX2Q6XYB7 198 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 NEK9Q8TD19 979 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 VWCEQ96DN2 955 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
CPSF7-214ENST00000535222 TRPC6Q9Y210 931 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 FLNBO75369 2602 aaKnown RBP9.54□□□□□ -0.88
CPSF7-214ENST00000535222 ELP1O95163 1332 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 MROH7Q68CQ1 1323 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 MAPK8IP3Q9UPT6 1336 aa9.54□□□□□ -0.88
CPSF7-214ENST00000535222 SPTBN2O15020 2390 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 PRR23AA6NEV1 266 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 PLIN1O60240 522 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 CA3P07451 260 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 NUBP1P53384 320 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 TAP1Q03518 808 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 TMEM67Q5HYA8 995 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 EDAQ92838 391 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 XPNPEP3Q9NQH7 507 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 FAM86C1Q9NVL1 165 aa9.53□□□□□ -0.88
CPSF7-214ENST00000535222 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms