RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 LMCD1Q9NZU5 365 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 CEP162Q5TB80 1403 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 EVC2Q86UK5 1308 aa5.98□□□□□ -1.45
SNHG1-201ENST00000535076 A0A087WUV0 522 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ADARB2-AS1A8MUL3 147 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 TGFBR3LH3BV60 316 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ALBP02768 609 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 MMEP08473 750 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 NAT2P11245 290 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 INPP5BP32019 993 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 USP11P51784 963 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 SLC8A3P57103 927 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ELOAQ14241 798 aaKnown RBP5.97□□□□□ -1.45
SNHG1-201ENST00000535076 SEPT7Q16181 437 aaKnown RBP5.97□□□□□ -1.45
SNHG1-201ENST00000535076 CNGA3Q16281 694 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 C8orf34Q49A92 452 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 CCDC184Q52MB2 194 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 IER5Q5VY09 327 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 RCSD1Q6JBY9 416 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 CCDC174Q6PII3 467 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 RSPH3Q86UC2 560 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 FAM114A1Q8IWE2 563 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 CCDC65Q8IXS2 484 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 TBC1D5Q92609 795 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 TAF4BQ92750 862 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 GOLGA1Q92805 767 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 TNFRSF25Q93038 417 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 RBM17Q96I25 401 aaKnown RBP5.97□□□□□ -1.45
SNHG1-201ENST00000535076 MPP4Q96JB8 637 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 IWS1Q96ST2 819 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 YIPF2Q9BWQ6 316 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 NACA2Q9H009 215 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 SAP130Q9H0E3 1048 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 TSPY26PQ9H489 355 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ZSCAN16Q9H4T2 348 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ANKIB1Q9P2G1 1089 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ITM2BQ9Y287 266 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 ZNF652Q9Y2D9 606 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 SLC30A1Q9Y6M5 507 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 MIA2Q96PC5 1412 aa5.97□□□□□ -1.45
SNHG1-201ENST00000535076 RRBP1Q9P2E9 1410 aaKnown RBP5.97□□□□□ -1.45
SNHG1-201ENST00000535076 BRD4O60885 1362 aaPredicted RBP5.96□□□□□ -1.45
SNHG1-201ENST00000535076 PIK3R4Q99570 1358 aa5.96□□□□□ -1.45
SNHG1-201ENST00000535076 GOLGA6L10A6NI86 522 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 FOXO3O43524 673 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 MTA2O94776 668 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 MYL1P05976 194 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 TGFB3P10600 412 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 ADH7P40394 386 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 CLK1P49759 484 aaKnown RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 RAB27AP51159 221 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 PSMD7P51665 324 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 SLC7A5Q01650 507 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 NCBP1Q09161 790 aaKnown RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 PABPC4Q13310 644 aaKnown RBP eCLIP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 KLHL40Q2TBA0 621 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 GBP6Q6ZN66 633 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 MICALCLQ6ZW33 695 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 CDC37L1Q7L3B6 337 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 MFN1Q8IWA4 741 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 CCAR1Q8IX12 1150 aaKnown RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 PEX5LQ8IYB4 626 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 SMYD1Q8NB12 490 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 FAM81AQ8TBF8 368 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 DDX11Q96FC9 970 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 MYO19Q96H55 970 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 NAF1Q96HR8 494 aaKnown RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 SCLT1Q96NL6 688 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 C8orf37Q96NL8 207 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 CDC5LQ99459 802 aaKnown RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 RABEP2Q9H5N1 569 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 RPAP3Q9H6T3 665 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 RGL1Q9NZL6 768 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 TMEM63CQ9P1W3 806 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 ZMAT5Q9UDW3 170 aaKnown RBP5.96□□□□□ -1.46
SNHG1-201ENST00000535076 PCSK1NQ9UHG2 260 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 MCM8Q9UJA3 840 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 NAGPAQ9UK23 515 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 USP20Q9Y2K6 914 aa5.96□□□□□ -1.46
SNHG1-201ENST00000535076 ROCK2O75116 1388 aaKnown RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 CHL1O00533 1208 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 GNB5O14775 395 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 OPLAHO14841 1288 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 ERC2O15083 957 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 CEP104O60308 925 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 ATG7O95352 703 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 CYP11B2P19099 503 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 IDH3AP50213 366 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 NSUN2Q08J23 767 aaKnown RBP eCLIP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 EIF4A2Q14240 407 aaKnown RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 COX20Q5RI15 118 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 MSL1Q68DK7 614 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 PACS1Q6VY07 963 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 C20orf204Q6ZNR8 217 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 CENPQQ7L2Z9 268 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 TTC30AQ86WT1 665 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 APLFQ8IW19 511 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 CCDC170Q8IYT3 715 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 GBP7Q8N8V2 638 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms