RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 MORN1Q5T089 497 aa14.09□□□□□ -0.15
CTNND1-238ENST00000534647 USP17L2Q6R6M4 530 aa14.09□□□□□ -0.15
CTNND1-238ENST00000534647 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
CTNND1-238ENST00000534647 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
CTNND1-238ENST00000534647 EHD4Q9H223 541 aa14.09□□□□□ -0.15
CTNND1-238ENST00000534647 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
CTNND1-238ENST00000534647 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
CTNND1-238ENST00000534647 DBNLQ9UJU6 430 aaKnown RBP14.09□□□□□ -0.15
CTNND1-238ENST00000534647 SIPA1L1O43166 1804 aa14.08□□□□□ -0.15
CTNND1-238ENST00000534647 ATAD5Q96QE3 1844 aa14.08□□□□□ -0.15
CTNND1-238ENST00000534647 APBB1O00213 710 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 CYP2B6P20813 491 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 CYP7A1P22680 504 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 ERVK-9P63128 1117 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 ERVK-24P63145 666 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
CTNND1-238ENST00000534647 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
CTNND1-238ENST00000534647 SOX1O00570 391 aaPredicted RBP14.07□□□□□ -0.16
CTNND1-238ENST00000534647 GDF11O95390 407 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 PYGBP11216 843 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 COL6A1P12109 1028 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
CTNND1-238ENST00000534647 DYNLL1P63167 89 aaKnown RBP14.07□□□□□ -0.16
CTNND1-238ENST00000534647 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
CTNND1-238ENST00000534647 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 SHROOM1Q2M3G4 852 aaPredicted RBP14.07□□□□□ -0.16
CTNND1-238ENST00000534647 LBX2Q6XYB7 198 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 PLEKHH3Q7Z736 793 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 EAF2Q96CJ1 260 aaPredicted RBP14.07□□□□□ -0.16
CTNND1-238ENST00000534647 RABGAP1Q9Y3P9 1069 aa14.07□□□□□ -0.16
CTNND1-238ENST00000534647 MAST2Q6P0Q8 1798 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 PLXNB2O15031 1838 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 SZT2Q5T011 3432 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 GH2P01242 217 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 RGS2P41220 211 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP14P54578 494 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
CTNND1-238ENST00000534647 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 LHX8Q68G74 356 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 TTC6Q86TZ1 520 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 KIAA1683Q9H0B3 1180 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 PORCNQ9H237 461 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
CTNND1-238ENST00000534647 SERPINB13Q9UIV8 391 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 ZBED9Q6R2W3 1325 aa14.06□□□□□ -0.16
CTNND1-238ENST00000534647 PEX10O60683 326 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 ZKSCAN1P17029 563 aaPredicted RBP14.05□□□□□ -0.16
CTNND1-238ENST00000534647 CCNA1P78396 465 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 MAP3K12Q12852 859 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 CCAR1Q8IX12 1150 aaKnown RBP14.05□□□□□ -0.16
CTNND1-238ENST00000534647 C7orf61Q8IZ16 206 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 APBA2Q99767 749 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 CCDC8Q9H0W5 538 aaPredicted RBP14.05□□□□□ -0.16
CTNND1-238ENST00000534647 TLR7Q9NYK1 1049 aaKnown RBP14.05□□□□□ -0.16
CTNND1-238ENST00000534647 FOCADQ5VW36 1801 aa14.05□□□□□ -0.16
CTNND1-238ENST00000534647 CNMDO75829 334 aa14.04□□□□□ -0.16
CTNND1-238ENST00000534647 IDH1O75874 414 aaKnown RBP14.04□□□□□ -0.16
CTNND1-238ENST00000534647 GLRX3O76003 335 aaKnown RBP14.04□□□□□ -0.16
CTNND1-238ENST00000534647 HOXC6P09630 235 aa14.04□□□□□ -0.16
CTNND1-238ENST00000534647 USP5P45974 858 aa14.04□□□□□ -0.16
CTNND1-238ENST00000534647 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
CTNND1-238ENST00000534647 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
CTNND1-238ENST00000534647 LRCH3Q96II8 777 aa14.04□□□□□ -0.16
CTNND1-238ENST00000534647 PFASO15067 1338 aa14.04□□□□□ -0.16
CTNND1-238ENST00000534647 SLC15A5A6NIM6 579 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 IGHA2P01877 340 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 CCL14Q16627 93 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 CERKLQ49MI3 558 aaPredicted RBP14.03□□□□□ -0.16
CTNND1-238ENST00000534647 ERC1Q8IUD2 1116 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
CTNND1-238ENST00000534647 MAGEB6Q8N7X4 407 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 RIOK1Q9BRS2 568 aaKnown RBP14.03□□□□□ -0.16
CTNND1-238ENST00000534647 PAGR1Q9BTK6 254 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 ZMYND8Q9ULU4 1186 aaPredicted RBP14.03□□□□□ -0.16
CTNND1-238ENST00000534647 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 ALPK3Q96L96 1907 aa14.03□□□□□ -0.16
CTNND1-238ENST00000534647 RLBP1P12271 317 aa14.02□□□□□ -0.17
CTNND1-238ENST00000534647 VCAM1P19320 739 aa14.02□□□□□ -0.17
CTNND1-238ENST00000534647 PTPREP23469 700 aa14.02□□□□□ -0.17
CTNND1-238ENST00000534647 CCND3P30281 292 aaPredicted RBP14.02□□□□□ -0.17
CTNND1-238ENST00000534647 MAGEA10P43363 369 aaPredicted RBP14.02□□□□□ -0.17
CTNND1-238ENST00000534647 GABPAQ06546 454 aa14.02□□□□□ -0.17
CTNND1-238ENST00000534647 TTF1Q15361 905 aaPredicted RBP14.02□□□□□ -0.17
CTNND1-238ENST00000534647 ABCB5Q2M3G0 1257 aa14.02□□□□□ -0.17
CTNND1-238ENST00000534647 CEP85Q6P2H3 762 aa14.02□□□□□ -0.17
CTNND1-238ENST00000534647 ITPRIPQ8IWB1 547 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms