RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 TTC22Q5TAA0 569 aa25.52■■□□□ 1.68
PKP3-211ENST00000534401 OTOP1Q7RTM1 612 aa25.52■■□□□ 1.68
PKP3-211ENST00000534401 GSPT1P15170 499 aaKnown RBP25.51■■□□□ 1.67
PKP3-211ENST00000534401 RASA1P20936 1047 aa25.51■■□□□ 1.67
PKP3-211ENST00000534401 TDO2P48775 406 aa25.51■■□□□ 1.67
PKP3-211ENST00000534401 LACTBP83111 547 aaPredicted RBP25.51■■□□□ 1.67
PKP3-211ENST00000534401 PABPC4Q13310 644 aaKnown RBP eCLIP25.51■■□□□ 1.67
PKP3-211ENST00000534401 VPS53Q5VIR6 699 aa25.51■■□□□ 1.67
PKP3-211ENST00000534401 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.51■■□□□ 1.67
PKP3-211ENST00000534401 TMOD4Q9NZQ9 345 aa25.51■■□□□ 1.67
PKP3-211ENST00000534401 CPA4Q9UI42 421 aa25.51■■□□□ 1.67
PKP3-211ENST00000534401 PNMA3Q9UL41 463 aa25.51■■□□□ 1.67
PKP3-211ENST00000534401 A0A1W2PRG0 241 aa25.5■■□□□ 1.67
PKP3-211ENST00000534401 APPP05067 770 aa25.5■■□□□ 1.67
PKP3-211ENST00000534401 USP14P54578 494 aa25.5■■□□□ 1.67
PKP3-211ENST00000534401 FBXO46Q6PJ61 603 aaPredicted RBP25.5■■□□□ 1.67
PKP3-211ENST00000534401 ZNF589Q86UQ0 364 aaPredicted RBP25.5■■□□□ 1.67
PKP3-211ENST00000534401 ASCC2Q9H1I8 757 aaPredicted RBP25.5■■□□□ 1.67
PKP3-211ENST00000534401 ZMYM6O95789 1325 aa25.49■■□□□ 1.67
PKP3-211ENST00000534401 MINDY4BA8MYZ0 360 aa25.49■■□□□ 1.67
PKP3-211ENST00000534401 NAPBQ9H115 298 aa25.49■■□□□ 1.67
PKP3-211ENST00000534401 ANAPC4Q9UJX5 808 aa25.49■■□□□ 1.67
PKP3-211ENST00000534401 HIP1O00291 1037 aa25.48■■□□□ 1.67
PKP3-211ENST00000534401 CTGFP29279 349 aa25.48■■□□□ 1.67
PKP3-211ENST00000534401 CENPQQ7L2Z9 268 aaPredicted RBP25.48■■□□□ 1.67
PKP3-211ENST00000534401 EFCC1Q9HA90 598 aa25.48■■□□□ 1.67
PKP3-211ENST00000534401 MGAMO43451 1857 aa25.48■■□□□ 1.67
PKP3-211ENST00000534401 ZSWIM8A7E2V4 1837 aa25.48■■□□□ 1.67
PKP3-211ENST00000534401 CCDC171Q6TFL3 1326 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 MPHOSPH10O00566 681 aaKnown RBP25.47■■□□□ 1.67
PKP3-211ENST00000534401 GNRH1P01148 92 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 HSPD1P10809 573 aaKnown RBP25.47■■□□□ 1.67
PKP3-211ENST00000534401 OSBPP22059 807 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 GCLCP48506 637 aaPredicted RBP25.47■■□□□ 1.67
PKP3-211ENST00000534401 PPARAQ07869 468 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 ARHGEF6Q15052 776 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 KANSL2Q9H9L4 492 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 TMX2Q9Y320 296 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 TRIM17Q9Y577 477 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 HTTP42858 3142 aa25.47■■□□□ 1.67
PKP3-211ENST00000534401 IGKV6D-41A0A0C4DH26 115 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 FGAP02671 866 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 FGRP09769 529 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 ARHGAP39Q9C0H5 1083 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 ZNF287Q9HBT7 754 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 PTPN22Q9Y2R2 807 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.46■■□□□ 1.672e-6■■■■□ 20.8
PKP3-211ENST00000534401 DOCK3Q8IZD9 2030 aa25.46■■□□□ 1.67
PKP3-211ENST00000534401 FAM110CQ1W6H9 321 aa25.45■■□□□ 1.66
PKP3-211ENST00000534401 POTEEQ6S8J3 1075 aa25.45■■□□□ 1.66
PKP3-211ENST00000534401 P2RX7Q99572 595 aaKnown RBP25.45■■□□□ 1.66
PKP3-211ENST00000534401 MORF4L1Q9UBU8 362 aa25.45■■□□□ 1.66
PKP3-211ENST00000534401 RLFQ13129 1914 aa25.45■■□□□ 1.66
PKP3-211ENST00000534401 VCAM1P19320 739 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
PKP3-211ENST00000534401 ICA1Q05084 483 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 CATSPERGQ6ZRH7 1159 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 SMCR8Q8TEV9 937 aaPredicted RBP25.44■■□□□ 1.66
PKP3-211ENST00000534401 TRIM47Q96LD4 638 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 FEZ1Q99689 392 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 MKNK2Q9HBH9 465 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 HPS5Q9UPZ3 1129 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 TACC3Q9Y6A5 838 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 PLIN4Q96Q06 1357 aa25.44■■□□□ 1.66
PKP3-211ENST00000534401 USP17L15C9J2P7 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L13C9JLJ4 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L11C9JVI0 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L18D6R9N7 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L22D6RA61 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L17D6RBQ6 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L19D6RCP7 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L20D6RJB6 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 USP17L24Q0WX57 530 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 KIF22Q14807 665 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 KIAA1755Q5JYT7 1200 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 LBX2Q6XYB7 198 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 CLEC10AQ8IUN9 316 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 NYAP2Q9P242 653 aa25.43■■□□□ 1.66
PKP3-211ENST00000534401 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
PKP3-211ENST00000534401 PSMC4P43686 418 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 PRMT2P55345 433 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 HERVK_113P62684 666 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 PDE4BQ07343 736 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 NEDD1Q8NHV4 660 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 LPAR1Q92633 364 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 ARHGEF10LQ9HCE6 1279 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 DIAPH3Q9NSV4 1193 aa25.42■■□□□ 1.66
PKP3-211ENST00000534401 SLC3A2P08195 630 aaKnown RBP25.41■■□□□ 1.66
PKP3-211ENST00000534401 IRX3P78415 501 aaPredicted RBP25.41■■□□□ 1.66
PKP3-211ENST00000534401 ZYXQ15942 572 aaKnown RBP25.41■■□□□ 1.66
PKP3-211ENST00000534401 CWC27Q6UX04 472 aaKnown RBP25.41■■□□□ 1.66
PKP3-211ENST00000534401 ZNF444Q8N0Y2 327 aaPredicted RBP25.41■■□□□ 1.66
PKP3-211ENST00000534401 GTF3C2Q8WUA4 911 aaPredicted RBP25.41■■□□□ 1.66
PKP3-211ENST00000534401 SH2D4AQ9H788 454 aa25.41■■□□□ 1.66
PKP3-211ENST00000534401 VCPKMTQ9H867 229 aa25.41■■□□□ 1.66
PKP3-211ENST00000534401 RBPJLQ9UBG7 517 aa25.41■■□□□ 1.66
PKP3-211ENST00000534401 ORC4O43929 436 aa25.4■■□□□ 1.66
PKP3-211ENST00000534401 ANKRD13CQ8N6S4 541 aa25.4■■□□□ 1.66
PKP3-211ENST00000534401 MKL1Q969V6 931 aa25.4■■□□□ 1.66
PKP3-211ENST00000534401 PRDM1O75626 825 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms