RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HDAC1Q13547 482 aaPredicted RBP16.94■□□□□ 0.3
SF3B2-215ENST00000534307 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
SF3B2-215ENST00000534307 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
SF3B2-215ENST00000534307 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
SF3B2-215ENST00000534307 KIAA1683Q9H0B3 1180 aa16.94■□□□□ 0.3
SF3B2-215ENST00000534307 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
SF3B2-215ENST00000534307 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 IRF5Q13568 498 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 RAB3GAP1Q15042 981 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 RAET1EQ8TD07 263 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 ACER1Q8TDN7 264 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 STRBPQ96SI9 672 aaKnown RBP16.93■□□□□ 0.3
SF3B2-215ENST00000534307 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
SF3B2-215ENST00000534307 MYH8P13535 1937 aa16.93■□□□□ 0.3
SF3B2-215ENST00000534307 TNPO2O14787 897 aaKnown RBP16.92■□□□□ 0.3
SF3B2-215ENST00000534307 GRK4P32298 578 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 FLT3LGP49771 235 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 HERVK_113P62684 666 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 IRX3P78415 501 aaPredicted RBP16.92■□□□□ 0.3
SF3B2-215ENST00000534307 SEPT2Q15019 361 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 MTFR1Q15390 333 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 C12orf60Q5U649 245 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 UBE2Q1Q7Z7E8 422 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 OSBP2Q969R2 916 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 DYNLL2Q96FJ2 89 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 TXNRD2Q9NNW7 524 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 CABP5Q9NP86 173 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
SF3B2-215ENST00000534307 EYSQ5T1H1 3165 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 USP17L12C9JPN9 530 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 USP17L21D6R901 530 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 RNF113AO15541 343 aaKnown RBP16.91■□□□□ 0.3
SF3B2-215ENST00000534307 SLAIN1Q8ND83 568 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 APPBP2Q92624 585 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 DPF3Q92784 378 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 FEZ1Q99689 392 aa16.91■□□□□ 0.3
SF3B2-215ENST00000534307 A0A1W2PRG0 241 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 PEX10O60683 326 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 GLRX3O76003 335 aaKnown RBP16.9■□□□□ 0.3
SF3B2-215ENST00000534307 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
SF3B2-215ENST00000534307 VCAM1P19320 739 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 MX1P20591 662 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 USP14P54578 494 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 AAMPQ13685 434 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
SF3B2-215ENST00000534307 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 TMEM179Q6ZVK1 233 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 C16orf86Q6ZW13 317 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 PXYLP1Q8TE99 480 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
SF3B2-215ENST00000534307 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 SOX1O00570 391 aaPredicted RBP16.89■□□□□ 0.29
SF3B2-215ENST00000534307 ERC2O15083 957 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 ADCY3O60266 1144 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 AKR1B1P15121 316 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 CDK8P49336 464 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 GTF3C2Q8WUA4 911 aaPredicted RBP16.89■□□□□ 0.29
SF3B2-215ENST00000534307 COA7Q96BR5 231 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 GJD2Q9UKL4 321 aa16.89■□□□□ 0.29
SF3B2-215ENST00000534307 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
SF3B2-215ENST00000534307 RLFQ13129 1914 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 GREB1LQ9C091 1923 aaPredicted RBP16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L15C9J2P7 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L13C9JLJ4 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L11C9JVI0 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L18D6R9N7 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L22D6RA61 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L17D6RBQ6 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L19D6RCP7 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L20D6RJB6 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 M0R2C6 588 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 ELNP15502 786 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 USP17L24Q0WX57 530 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 CATSPERGQ6ZRH7 1159 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 GPRC5AQ8NFJ5 357 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 DDRGK1Q96HY6 314 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
SF3B2-215ENST00000534307 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
SF3B2-215ENST00000534307 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
SF3B2-215ENST00000534307 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
SF3B2-215ENST00000534307 GPAA1O43292 621 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 CNMDO75829 334 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 CCL5P13501 91 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 ERVK-9P63128 1117 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 ERVK-24P63145 666 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 Q3C1V9 767 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 LBX2Q6XYB7 198 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 CCDC17Q96LX7 622 aa16.87■□□□□ 0.29
SF3B2-215ENST00000534307 GJA8P48165 433 aa16.86■□□□□ 0.29
SF3B2-215ENST00000534307 KIAA1755Q5JYT7 1200 aa16.86■□□□□ 0.29
SF3B2-215ENST00000534307 CLEC10AQ8IUN9 316 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms