RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 TBC1D31Q96DN5 1066 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 ZNF408Q9H9D4 720 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 ADRA2BP18089 450 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 SPATS2LQ9NUQ6 558 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 GNGT1P63211 74 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 INF2Q27J81 1249 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 VPS16Q9H269 839 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 BRD1O95696 1058 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 CYP7A1P22680 504 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 CFAP221Q4G0U5 840 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 DTHD1Q6ZMT9 781 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 VPS52Q8N1B4 723 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 SMARCC2Q8TAQ2 1214 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 FAM71BQ8TC56 605 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 NOC4LQ9BVI4 516 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 STX8Q9UNK0 236 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 INO80Q9ULG1 1556 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
AMBRA1-212ENST00000534300 TMEM110-MUSTN1A8MSY1 372 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 KRT2P35908 639 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 LIG3P49916 1009 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 USPL1Q5W0Q7 1092 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 EFCC1Q9HA90 598 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 ZC3H13Q5T200 1668 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 RNF40O75150 1001 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 TNFAIP1Q13829 316 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 DALRD3Q5D0E6 543 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 TBC1D22AQ8WUA7 517 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 HIBADHP31937 336 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 ZNF131P52739 623 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 CPS1P31327 1500 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 GOLGA8KD6RF30 607 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 KRT71Q3SY84 523 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 SDCCAG8Q86SQ7 713 aaPredicted RBP13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 CCDC51Q96ER9 411 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 SH2D4AQ9H788 454 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 PALLDQ8WX93 1383 aa13.47□□□□□ -0.25
AMBRA1-212ENST00000534300 PABPN1LA6NDY0 278 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 LUC7L3O95232 432 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 RPL13P26373 211 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 MAGEA1P43355 309 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 NDC80O14777 642 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 CETN3O15182 167 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 GADD45BO75293 160 aaPredicted RBP13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 CRB1P82279 1406 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 VAMP4O75379 141 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 ARHGEF6Q15052 776 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 CAPS2Q9BXY5 557 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 SSX2IPQ9Y2D8 614 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.25
AMBRA1-212ENST00000534300 UNC13BO14795 1591 aa13.46□□□□□ -0.26
AMBRA1-212ENST00000534300 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.26
AMBRA1-212ENST00000534300 SERPINB2P05120 415 aa13.46□□□□□ -0.26
AMBRA1-212ENST00000534300 NUF2Q9BZD4 464 aa13.46□□□□□ -0.26
AMBRA1-212ENST00000534300 C6orf50Q9HD87 102 aa13.46□□□□□ -0.26
AMBRA1-212ENST00000534300 KDM5AP29375 1690 aaKnown RBP13.46□□□□□ -0.26
AMBRA1-212ENST00000534300 CUTAO60888 179 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 EFCAB13Q8IY85 973 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 PICK1Q9NRD5 415 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 RRP15Q9Y3B9 282 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 SEPT14Q6ZU15 432 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 IGSF1Q8N6C5 1336 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 GJC1P36383 396 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 MRFAP1L1Q96HT8 127 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 IMPG2Q9BZV3 1241 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 PAG1Q9NWQ8 432 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 CHL1O00533 1208 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 ZNF202O95125 648 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 ITGA6P23229 1130 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 ERCC5P28715 1186 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 CCDC170Q8IYT3 715 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 PPANQ9NQ55 473 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
AMBRA1-212ENST00000534300 DCCP43146 1447 aa13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 GMNNO75496 209 aa13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 ATP2B4P23634 1241 aa13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 PLCD1P51178 756 aa13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
AMBRA1-212ENST00000534300 ANKRD20A3Q5VUR7 823 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms