RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 FBXL18Q96ME1 805 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 KLHL3Q9UH77 587 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 VAV3Q9UKW4 847 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 CEP131Q9UPN4 1083 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 SLC5A6Q9Y289 635 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 SNX11Q9Y5W9 270 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 OAS3Q9Y6K5 1087 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 ZNF865P0CJ78 1059 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 CYP7A1P22680 504 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 ETV3P41162 512 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 PRKCQQ04759 706 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 CLCQ05315 142 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 BNIP3Q12983 259 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 MLECQ14165 292 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 C9orf131Q5VYM1 1079 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 NT5DC4Q86YG4 428 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 WFDC3Q8IUB2 231 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 ZNF654Q8IZM8 581 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 FLCNQ8NFG4 579 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 COX4I2Q96KJ9 171 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 PAK6Q9NQU5 681 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-211ENST00000534216 SLC22A31A6NKX4 558 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 RBAK-RBAKDNI3L0D1 243 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 MCM4P33991 863 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 ZNF165P49910 485 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 AOC3Q16853 763 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 ZNF574Q6ZN55 896 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 SPRED2Q7Z698 418 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 MFSD4AQ8N468 514 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 GMIPQ9P107 970 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 CAPN6Q9Y6Q1 641 aa6.67□□□□□ -1.34
ATPAF1-211ENST00000534216 FAM155AB1AL88 458 aaPredicted RBP6.66□□□□□ -1.34
ATPAF1-211ENST00000534216 CBX7O95931 251 aa6.66□□□□□ -1.34
ATPAF1-211ENST00000534216 CLCN7P51798 805 aa6.66□□□□□ -1.34
ATPAF1-211ENST00000534216 CCDC74BQ96LY2 380 aa6.66□□□□□ -1.34
ATPAF1-211ENST00000534216 CD8BP10966 210 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 CD96P40200 585 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 KIR3DL1P43629 444 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 ARSHQ5FYA8 562 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 TP53INP2Q8IXH6 220 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 PHACTR4Q8IZ21 702 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 ABI1Q8IZP0 508 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 BAHD1Q8TBE0 780 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 KIF2CQ99661 725 aa6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-211ENST00000534216 COL17A1Q9UMD9 1497 aaPredicted RBP6.65□□□□□ -1.35
ATPAF1-211ENST00000534216 RGS13O14921 159 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 TNNI2P48788 182 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 TNK2Q07912 1038 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 PAK2Q13177 524 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 CDKAL1Q5VV42 579 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 CDCP2Q5VXM1 449 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 OVOS1Q6IE37 1185 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 AGBL5Q8NDL9 886 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 ASB11Q8WXH4 323 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 HSPA12BQ96MM6 686 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 ANTXR1Q9H6X2 564 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 CNNM2Q9H8M5 875 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 ST14Q9Y5Y6 855 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 PITPNM2Q9BZ72 1349 aa6.64□□□□□ -1.35
ATPAF1-211ENST00000534216 RAG1P15918 1043 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 RBM25P49756 843 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 RAD51AP2Q09MP3 1159 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 LRRFIP1Q32MZ4 808 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 PIWIL2Q8TC59 973 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 ATG4CQ96DT6 458 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 Q96M66 194 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 KREMEN1Q96MU8 473 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 SEMA3GQ9NS98 782 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
ATPAF1-211ENST00000534216 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 UBOX5O94941 541 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 FUT4P22083 530 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 GBP1P32455 592 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 NLRC3Q7RTR2 1065 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 TGIF2Q9GZN2 237 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 ADGRE2Q9UHX3 823 aa6.62□□□□□ -1.35
ATPAF1-211ENST00000534216 H3BS24 57 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 IMPDH2P12268 514 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 NME1P15531 152 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 POLR2BP30876 1174 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 GJA8P48165 433 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 COL9A2Q14055 689 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 THAP5Q7Z6K1 395 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 DTWD2Q8NBA8 298 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 RASGRP4Q8TDF6 673 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 GPRASP2Q96D09 838 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 SPATA32Q96LK8 384 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 GINM1Q9NU53 330 aa6.61□□□□□ -1.35
ATPAF1-211ENST00000534216 LRRN2O75325 713 aa6.6□□□□□ -1.35
ATPAF1-211ENST00000534216 TCF3P15923 654 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms