RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 USP17L11C9JVI0 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L18D6R9N7 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L22D6RA61 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L19D6RCP7 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L20D6RJB6 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 IPO8O15397 1037 aaKnown RBP18.27■□□□□ 0.52
CTSB-230ENST00000534149 CYP7A1P22680 504 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L24Q0WX57 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 POLA2Q14181 598 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 SENP6Q9GZR1 1112 aaPredicted RBP18.27■□□□□ 0.52
CTSB-230ENST00000534149 BCAR3O75815 825 aa18.26■□□□□ 0.51
CTSB-230ENST00000534149 CCNA1P78396 465 aa18.26■□□□□ 0.51
CTSB-230ENST00000534149 RAB3GAP1Q15042 981 aa18.26■□□□□ 0.51
CTSB-230ENST00000534149 MFSD14CQ5VZR4 134 aa18.26■□□□□ 0.51
CTSB-230ENST00000534149 TLR7Q9NYK1 1049 aaKnown RBP18.26■□□□□ 0.51
CTSB-230ENST00000534149 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
CTSB-230ENST00000534149 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
CTSB-230ENST00000534149 VCAM1P19320 739 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 PTPREP23469 700 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 CNGA1P29973 690 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 USP5P45974 858 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 ATN1P54259 1190 aaPredicted RBP18.25■□□□□ 0.51
CTSB-230ENST00000534149 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 CATSPERGQ6ZRH7 1159 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 ZNF512BQ96KM6 892 aaPredicted RBP18.25■□□□□ 0.51
CTSB-230ENST00000534149 BTBD7Q9P203 1132 aa18.25■□□□□ 0.51
CTSB-230ENST00000534149 DDX20Q9UHI6 824 aaKnown RBP18.25■□□□□ 0.51
CTSB-230ENST00000534149 DBNLQ9UJU6 430 aaKnown RBP18.25■□□□□ 0.51
CTSB-230ENST00000534149 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
CTSB-230ENST00000534149 USP14P54578 494 aa18.24■□□□□ 0.51
CTSB-230ENST00000534149 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
CTSB-230ENST00000534149 NPLOC4Q8TAT6 608 aa18.24■□□□□ 0.51
CTSB-230ENST00000534149 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
CTSB-230ENST00000534149 LBHD1Q9BQE6 289 aaPredicted RBP18.24■□□□□ 0.51
CTSB-230ENST00000534149 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
CTSB-230ENST00000534149 IGSF3O75054 1194 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 CYP2C19P33261 490 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 ATP2B2Q01814 1243 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 GRB14Q14449 540 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 CERKLQ49MI3 558 aaPredicted RBP18.23■□□□□ 0.51
CTSB-230ENST00000534149 MAGEB6Q8N7X4 407 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 FAM161BQ96MY7 647 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 KIAA1683Q9H0B3 1180 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
CTSB-230ENST00000534149 EHD4Q9H223 541 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 LTBP2Q14767 1821 aa18.23■□□□□ 0.51
CTSB-230ENST00000534149 SPDYE16A6NNV3 312 aaPredicted RBP18.22■□□□□ 0.51
CTSB-230ENST00000534149 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
CTSB-230ENST00000534149 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
CTSB-230ENST00000534149 ABCB5Q2M3G0 1257 aa18.22■□□□□ 0.51
CTSB-230ENST00000534149 LBX2Q6XYB7 198 aa18.22■□□□□ 0.51
CTSB-230ENST00000534149 TRPV1Q8NER1 839 aa18.22■□□□□ 0.51
CTSB-230ENST00000534149 LPAR1Q92633 364 aa18.22■□□□□ 0.51
CTSB-230ENST00000534149 RPAP3Q9H6T3 665 aaPredicted RBP18.22■□□□□ 0.51
CTSB-230ENST00000534149 DNM1LO00429 736 aa18.21■□□□□ 0.51
CTSB-230ENST00000534149 MSCO60682 206 aa18.21■□□□□ 0.51
CTSB-230ENST00000534149 HOXC6P09630 235 aa18.21■□□□□ 0.51
CTSB-230ENST00000534149 RTP1P59025 263 aa18.21■□□□□ 0.51
CTSB-230ENST00000534149 FAM109BQ6ICB4 259 aaPredicted RBP18.21■□□□□ 0.51
CTSB-230ENST00000534149 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
CTSB-230ENST00000534149 CABP5Q9NP86 173 aa18.21■□□□□ 0.51
CTSB-230ENST00000534149 RLFQ13129 1914 aa18.21■□□□□ 0.51
CTSB-230ENST00000534149 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 CYBAP13498 195 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 SHMT1P34896 483 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 CERS3Q8IU89 383 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.2■□□□□ 0.5
CTSB-230ENST00000534149 EAF2Q96CJ1 260 aaPredicted RBP18.2■□□□□ 0.5
CTSB-230ENST00000534149 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 PRKAG2Q9UGJ0 569 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 EYSQ5T1H1 3165 aa18.2■□□□□ 0.5
CTSB-230ENST00000534149 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
CTSB-230ENST00000534149 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
CTSB-230ENST00000534149 PLCD1P51178 756 aa18.19■□□□□ 0.5
CTSB-230ENST00000534149 GJC2Q5T442 439 aaPredicted RBP18.19■□□□□ 0.5
CTSB-230ENST00000534149 ATP11BQ9Y2G3 1177 aa18.19■□□□□ 0.5
CTSB-230ENST00000534149 VCANP13611 3396 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 IGHA2P01877 340 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 ADORA2AP29274 412 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 SEPT2Q15019 361 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 ANO1Q5XXA6 986 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
CTSB-230ENST00000534149 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
CTSB-230ENST00000534149 EVX2Q03828 476 aa18.17■□□□□ 0.5
CTSB-230ENST00000534149 MAP3K12Q12852 859 aa18.17■□□□□ 0.5
CTSB-230ENST00000534149 ZNF697Q5TEC3 545 aa18.17■□□□□ 0.5
CTSB-230ENST00000534149 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
CTSB-230ENST00000534149 A0A0G2JMZ2 1700 aa18.17■□□□□ 0.5
CTSB-230ENST00000534149 A0A1W2PRG0 241 aa18.16■□□□□ 0.5
CTSB-230ENST00000534149 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms