RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 DNM1LO00429 736 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 CNMDO75829 334 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 UQCRFS1P1P0C7P4 283 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 PTPREP23469 700 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
PACS1-214ENST00000533811 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 SHHQ15465 462 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 C9orf50Q5SZB4 431 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 LPAR1Q92633 364 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 GINM1Q9NU53 330 aa11.35□□□□□ -0.59
PACS1-214ENST00000533811 DNAH12Q6ZR08 3092 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 KBTBD13C9JR72 458 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 MSCO60682 206 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 GNAI3P08754 354 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
PACS1-214ENST00000533811 ATF7IPQ6VMQ6 1270 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 ADGRA1Q86SQ6 560 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 BADQ92934 168 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 CDCA7LQ96GN5 454 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
PACS1-214ENST00000533811 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
PACS1-214ENST00000533811 FOSL2P15408 326 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 USP14P54578 494 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 DPP9Q86TI2 863 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 ARRDC4Q8NCT1 418 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 TRPV1Q8NER1 839 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 BTBD7Q9P203 1132 aa11.33□□□□□ -0.6
PACS1-214ENST00000533811 EYSQ5T1H1 3165 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 VCAM1P19320 739 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 USP5P45974 858 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 PPP4CP60510 307 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
PACS1-214ENST00000533811 GRB14Q14449 540 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 CCDC158Q5M9N0 1113 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 SLC39A5Q6ZMH5 540 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 METTL16Q86W50 562 aaKnown RBP11.32□□□□□ -0.6
PACS1-214ENST00000533811 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 TTYH1Q9H313 450 aaPredicted RBP11.32□□□□□ -0.6
PACS1-214ENST00000533811 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
PACS1-214ENST00000533811 PRDM6Q9NQX0 595 aa11.32□□□□□ -0.6
PACS1-214ENST00000533811 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 VCANP13611 3396 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
PACS1-214ENST00000533811 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
PACS1-214ENST00000533811 HOXC6P09630 235 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 CYBAP13498 195 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 CYP7A1P22680 504 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 MTX1Q13505 466 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
PACS1-214ENST00000533811 SH3RF1Q7Z6J0 888 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 MIGA1Q8NAN2 632 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 PDLIM7Q9NR12 457 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
PACS1-214ENST00000533811 PNMA6EA0A0J9YXQ4 647 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 GNAI2P04899 355 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 ADORA2AP29274 412 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 ZAP70P43403 619 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 SMAD3P84022 425 aaKnown RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 SYMPKQ92797 1274 aaKnown RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 RNPC3Q96LT9 517 aaKnown RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
PACS1-214ENST00000533811 ZNFX1Q9P2E3 1918 aaKnown RBP11.3□□□□□ -0.6
PACS1-214ENST00000533811 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
PACS1-214ENST00000533811 SEPT4O43236 478 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 PLS1Q14651 629 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 MOV10L1Q9BXT6 1211 aaKnown RBP11.29□□□□□ -0.6
PACS1-214ENST00000533811 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 MYH8P13535 1937 aa11.29□□□□□ -0.6
PACS1-214ENST00000533811 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
PACS1-214ENST00000533811 ERCC3P19447 782 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 TLE2Q04725 743 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 LRRC41Q15345 812 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 FAM47AQ5JRC9 791 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms