RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 HERC4Q5GLZ8 1057 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-236ENST00000533667 CABP7Q86V35 215 aa7.78□□□□□ -1.16
CTNND1-236ENST00000533667 SPATS2Q86XZ4 545 aaKnown RBP7.78□□□□□ -1.16
CTNND1-236ENST00000533667 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
CTNND1-236ENST00000533667 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
CTNND1-236ENST00000533667 KDRP35968 1356 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC160A6NGH7 325 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 GADD45BO75293 160 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 MYCNP04198 464 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 PSMC4P43686 418 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 EIF4A1P60842 406 aaKnown RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 CALCRLQ16602 461 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 GPCPD1Q9NPB8 672 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 TAB2Q9NYJ8 693 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 KDM5AP29375 1690 aaKnown RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 ATP7AQ04656 1500 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 PCP11498 1178 aaKnown RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 CMA1P23946 247 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 HPDP32754 393 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 NEDD9Q14511 834 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 PLS1Q14651 629 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 OR8K1Q8NGG5 319 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 ZSWIM6Q9HCJ5 1215 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 TMEM63CQ9P1W3 806 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 ODF2LQ9ULJ1 636 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 E7EVH7 732 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 UFL1O94874 794 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 TRPC3Q13507 836 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.77□□□□□ -1.176e-14■□□□□ 9.9
CTNND1-236ENST00000533667 TMOD4Q9NZQ9 345 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 CTTNBP2NLQ9P2B4 639 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 SAR1BQ9Y6B6 198 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 ZNF532Q9HCE3 1301 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 CEP104O60308 925 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 KCNA6P17658 529 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 MTX1Q13505 466 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 SMC1BQ8NDV3 1235 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 IFIH1Q9BYX4 1025 aaKnown RBP7.77□□□□□ -1.17
CTNND1-236ENST00000533667 SERPINA10Q9UK55 444 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 ZBTB21Q9ULJ3 1066 aa7.77□□□□□ -1.17
CTNND1-236ENST00000533667 TRIM37O94972 964 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 DNM2P50570 870 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 SATB1Q01826 763 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ME3Q16798 604 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 TSNAXIP1Q2TAA8 658 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 FAM173BQ6P4H8 233 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 PEX26Q7Z412 305 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 REXO1Q8N1G1 1221 aaKnown RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 CABS1Q96KC9 395 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 XPO4Q9C0E2 1151 aaKnown RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 MAGEF1Q9HAY2 307 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ATP8A2Q9NTI2 1148 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC169A6NNP5 214 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 EFCAB8A8MWE9 144 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ERVV-2B6SEH9 535 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 YWHAEP62258 255 aaKnown RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 SH2D4BQ5SQS7 431 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 NOSTRINQ8IVI9 506 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 GOLGA5Q8TBA6 731 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 KIFC2Q96AC6 838 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 VCX3BQ9H321 246 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ZMYM6O95789 1325 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 PSDA5PKW4 1024 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 NEURL1BA8MQ27 555 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 H7C1D1 291 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 TPD52P55327 224 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 APBA1Q02410 837 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ZBTB17Q13105 803 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 DPH6Q7L8W6 267 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC117Q8IWD4 279 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 VPS52Q8N1B4 723 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 P3H4Q92791 437 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 HAUS4Q9H6D7 363 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC87Q9NVE4 849 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ASIC3Q9UHC3 531 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 SAP30BPQ9UHR5 308 aaKnown RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 A0A1W2PQ27 194 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 A0A1W2PQ64 194 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 A0A1W2PQD8 194 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 EXOC3O60645 756 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 PFKFB1P16118 471 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 OAS2P29728 719 aaKnown RBP7.76□□□□□ -1.17
CTNND1-236ENST00000533667 CDC25BP30305 580 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 SLC1A4P43007 532 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ZAP70P43403 619 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 RASSF2P50749 326 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 ITIH3Q06033 890 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 NCAPH2Q6IBW4 605 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
CTNND1-236ENST00000533667 GNPATO15228 680 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 JAK2O60674 1132 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 N4BP1O75113 896 aaKnown RBP7.75□□□□□ -1.17
CTNND1-236ENST00000533667 PPM1FP49593 454 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-236ENST00000533667 HHATQ5VTY9 493 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 OTUD7BQ6GQQ9 843 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 ZNF654Q8IZM8 581 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 SUPT20HQ8NEM7 779 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 CABLES1Q8TDN4 633 aa7.75□□□□□ -1.17
CTNND1-236ENST00000533667 SLF1Q9BQI6 1058 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms