RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
COMMD9-208ENST00000533643 WDR19Q8NEZ3 1342 aa14.03□□□□□ -0.16
COMMD9-208ENST00000533643 TRPM7Q96QT4 1865 aa14.02□□□□□ -0.16
COMMD9-208ENST00000533643 TNKSO95271 1327 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 TMEM88BA6NKF7 163 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 USP17L5A8MUK1 530 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
COMMD9-208ENST00000533643 NOVP48745 357 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 NEK4P51957 841 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 HUNKP57058 714 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 SEC23AQ15436 765 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 CCDC178Q5BJE1 867 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 TMEM67Q5HYA8 995 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 RCSD1Q6JBY9 416 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 ENAHQ8N8S7 591 aaPredicted RBP14.02□□□□□ -0.17
COMMD9-208ENST00000533643 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 ANKS1AQ92625 1134 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 SLC10A4Q96EP9 437 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 TMEM87BQ96K49 555 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 MTA3Q9BTC8 594 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.02□□□□□ -0.17
COMMD9-208ENST00000533643 NYAP2Q9P242 653 aa14.02□□□□□ -0.17
COMMD9-208ENST00000533643 SH2B2O14492 632 aaPredicted RBP14.01□□□□□ -0.17
COMMD9-208ENST00000533643 TTLL1O95922 423 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 EEF2P13639 858 aaKnown RBP14.01□□□□□ -0.17
COMMD9-208ENST00000533643 ICA1Q05084 483 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
COMMD9-208ENST00000533643 RABEP1Q15276 862 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 SAPCD2Q86UD0 394 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 ERO1BQ86YB8 467 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 ACER1Q8TDN7 264 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 MKL1Q969V6 931 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 TTC14Q96N46 770 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 WDR18Q9BV38 432 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 LY9Q9HBG7 655 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 SENP2Q9HC62 589 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 PDRG1Q9NUG6 133 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 CLIP2Q9UDT6 1046 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 TLL2Q9Y6L7 1015 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 ZHX2Q9Y6X8 837 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 MYH8P13535 1937 aa14.01□□□□□ -0.17
COMMD9-208ENST00000533643 GREB1LQ9C091 1923 aaPredicted RBP14.01□□□□□ -0.17
COMMD9-208ENST00000533643 OTOFQ9HC10 1997 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 A0A1W2PRG0 241 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 SPDYE5A6NIY4 337 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 APLP1P51693 650 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 ATP2B2Q01814 1243 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 Q6ZUG5 572 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 DGKHQ86XP1 1220 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 FBXL16Q8N461 479 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 TMEM47Q9BQJ4 181 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 AGXT2Q9BYV1 514 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 ALDH8A1Q9H2A2 487 aaPredicted RBP14□□□□□ -0.17
COMMD9-208ENST00000533643 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
COMMD9-208ENST00000533643 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 ERICH2A1L162 156 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 TOP1P11387 765 aaKnown RBP13.99□□□□□ -0.17
COMMD9-208ENST00000533643 GJA5P36382 358 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 LIFRP42702 1097 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 ECE1P42892 770 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 FGD1P98174 961 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 PPATQ06203 517 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
COMMD9-208ENST00000533643 WTAPQ15007 396 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 IFIT1BQ5T764 474 aaKnown RBP13.99□□□□□ -0.17
COMMD9-208ENST00000533643 ZNF280CQ8ND82 737 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 STX8Q9UNK0 236 aa13.99□□□□□ -0.17
COMMD9-208ENST00000533643 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 SPP2Q13103 211 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 PPIL2Q13356 520 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 BRF1Q92994 677 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 WNK4Q96J92 1243 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 AS3MTQ9HBK9 375 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 ARHGEF10LQ9HCE6 1279 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 ABT1Q9ULW3 272 aaKnown RBP13.98□□□□□ -0.17
COMMD9-208ENST00000533643 TMX2Q9Y320 296 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 ATAD5Q96QE3 1844 aa13.98□□□□□ -0.17
COMMD9-208ENST00000533643 IRF6O14896 467 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 ZNF157P51786 506 aaPredicted RBP13.97□□□□□ -0.17
COMMD9-208ENST00000533643 AK2P54819 239 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 APOBRQ0VD83 1088 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 KIAA1755Q5JYT7 1200 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 SGMS1Q86VZ5 419 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
COMMD9-208ENST00000533643 HHIPL1Q96JK4 782 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
COMMD9-208ENST00000533643 KIAA1683Q9H0B3 1180 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 KAT14Q9H8E8 782 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 BRPF3Q9ULD4 1205 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
COMMD9-208ENST00000533643 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 USP17L10C9JJH3 530 aa13.96□□□□□ -0.17
COMMD9-208ENST00000533643 CXCL11O14625 94 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms