RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SPRYD7Q5W111 196 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 NEK1Q96PY6 1258 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 UBAC1Q9BSL1 405 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 ARHGEF10LQ9HCE6 1279 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 ZSWIM5Q9P217 1185 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 STX8Q9UNK0 236 aa20.58■□□□□ 0.89
NXF1-216ENST00000533499 IRF6O14896 467 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 SLC10A3P09131 477 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 EEF2P13639 858 aaKnown RBP20.57■□□□□ 0.88
NXF1-216ENST00000533499 GJA5P36382 358 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 PPIL2Q13356 520 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 IQCA1Q86XH1 822 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 ZNF280CQ8ND82 737 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 ACER1Q8TDN7 264 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 CHMP4CQ96CF2 233 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 CEP95Q96GE4 821 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 HHIPL1Q96JK4 782 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.57■□□□□ 0.88
NXF1-216ENST00000533499 CLIP2Q9UDT6 1046 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 MTMR7Q9Y216 660 aa20.57■□□□□ 0.88
NXF1-216ENST00000533499 C22orf23Q9BZE7 217 aa20.56■□□□□ 0.88
NXF1-216ENST00000533499 ERICH2A1L162 156 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 IFIT3O14879 490 aaKnown RBP20.55■□□□□ 0.88
NXF1-216ENST00000533499 PRC1O43663 620 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 AOC2O75106 756 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 CPA1P15085 419 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
NXF1-216ENST00000533499 MCM5P33992 734 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 FGD1P98174 961 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 MTMR2Q13614 643 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 MB21D2Q8IYB1 491 aaPredicted RBP20.55■□□□□ 0.88
NXF1-216ENST00000533499 TCEANC2Q96MN5 208 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
NXF1-216ENST00000533499 AFG3L2Q9Y4W6 797 aa20.55■□□□□ 0.88
NXF1-216ENST00000533499 USP17L10C9JJH3 530 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 TTLL1O95922 423 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 ZBTB48P10074 688 aaPredicted RBP20.54■□□□□ 0.88
NXF1-216ENST00000533499 PSMA5P28066 241 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 VEGFBP49765 207 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 SNAPC2Q13487 334 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
NXF1-216ENST00000533499 TSGA10IPQ3SY00 556 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 BLOC1S2Q6QNY1 142 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 LRRC47Q8N1G4 583 aaKnown RBP20.54■□□□□ 0.88
NXF1-216ENST00000533499 KCNB2Q92953 911 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 ZSCAN10Q96SZ4 725 aaPredicted RBP20.54■□□□□ 0.88
NXF1-216ENST00000533499 WDR18Q9BV38 432 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 LRRC2Q9BYS8 371 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 SH2D4AQ9H788 454 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 MTMR4Q9NYA4 1195 aa20.54■□□□□ 0.88
NXF1-216ENST00000533499 TNKSO95271 1327 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
NXF1-216ENST00000533499 CCL15-CCL14A0A0B4J2E2 113 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 IGKV6D-41A0A0C4DH26 115 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 FAM155AB1AL88 458 aaPredicted RBP20.53■□□□□ 0.88
NXF1-216ENST00000533499 GTF2A2P52657 109 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 HMGCS2P54868 508 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 KIF23Q02241 960 aaPredicted RBP20.53■□□□□ 0.88
NXF1-216ENST00000533499 DGKZQ13574 1117 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 CCL15Q16663 113 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 CCDC178Q5BJE1 867 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 TMEM67Q5HYA8 995 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 TMOD4Q9NZQ9 345 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 PLIN4Q96Q06 1357 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 MYH4Q9Y623 1939 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 PHIPQ8WWQ0 1821 aa20.53■□□□□ 0.88
NXF1-216ENST00000533499 A0A1W2PRG0 241 aa20.52■□□□□ 0.88
NXF1-216ENST00000533499 NT5C2P49902 561 aa20.52■□□□□ 0.88
NXF1-216ENST00000533499 NOGQ13253 232 aa20.52■□□□□ 0.88
NXF1-216ENST00000533499 ZIC5Q96T25 663 aa20.52■□□□□ 0.88
NXF1-216ENST00000533499 NYAP2Q9P242 653 aa20.52■□□□□ 0.88
NXF1-216ENST00000533499 GREB1LQ9C091 1923 aaPredicted RBP20.51■□□□□ 0.87
NXF1-216ENST00000533499 CXCL11O14625 94 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 HMGB1P09429 215 aaKnown RBP20.51■□□□□ 0.87
NXF1-216ENST00000533499 CETPP11597 493 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 BACE1P56817 501 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 ANTXR2P58335 489 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 COL9A3Q14050 684 aaPredicted RBP20.51■□□□□ 0.87
NXF1-216ENST00000533499 WTAPQ15007 396 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
NXF1-216ENST00000533499 USP17L2Q6R6M4 530 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 DHX32Q7L7V1 743 aaKnown RBP20.51■□□□□ 0.87
NXF1-216ENST00000533499 SIAH1Q8IUQ4 282 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 SPICE1Q8N0Z3 855 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 UPF3BQ9BZI7 483 aaKnown RBP20.51■□□□□ 0.87
NXF1-216ENST00000533499 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
NXF1-216ENST00000533499 MANSC4A6NHS7 340 aaPredicted RBP20.5■□□□□ 0.87
NXF1-216ENST00000533499 C19orf81C9J6K1 198 aa20.5■□□□□ 0.87
NXF1-216ENST00000533499 USP14P54578 494 aa20.5■□□□□ 0.87
NXF1-216ENST00000533499 ANAPC15P60006 121 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms