RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NELFCDQ8IXH7 590 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 ADCY10Q96PN6 1610 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 ALDH1B1P30837 517 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 ZNF827Q17R98 1081 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 LONRF3Q496Y0 759 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 FMNL3Q8IVF7 1028 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 JAKMIP2Q96AA8 810 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 SEC31BQ9NQW1 1179 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 RSPH14Q9UHP6 348 aa19.61■□□□□ 0.73
PHRF1-205ENST00000533464 MYRIPQ8NFW9 859 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 PI4K2BQ8TCG2 481 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 M0R2C6 588 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 IGSF3O75054 1194 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 DDX12PQ92771 950 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 TEKT1Q969V4 418 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 CCDC77Q9BR77 488 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 SCG2P13521 617 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 NSUN7Q8NE18 718 aaKnown RBP19.6■□□□□ 0.73
PHRF1-205ENST00000533464 IQGAP3Q86VI3 1631 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
PHRF1-205ENST00000533464 KLRF2D3W0D1 207 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 BIRC3Q13489 604 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 INF2Q27J81 1249 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 APOA5Q6Q788 366 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 MAEAQ7L5Y9 396 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
PHRF1-205ENST00000533464 ATP2C2O75185 946 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 ADKP55263 362 aaKnown RBP19.59■□□□□ 0.73
PHRF1-205ENST00000533464 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 SMTNP53814 917 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 SLF1Q9BQI6 1058 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 ATG3Q9NT62 314 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 CALUO43852 315 aaPredicted RBP19.59■□□□□ 0.73
PHRF1-205ENST00000533464 DNAJC21Q5F1R6 531 aaKnown RBP19.59■□□□□ 0.73
PHRF1-205ENST00000533464 NLRP10Q86W26 655 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 OSBP2Q969R2 916 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 PICK1Q9NRD5 415 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 HEG1Q9ULI3 1381 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 DDX39AO00148 427 aaKnown RBP19.59■□□□□ 0.73
PHRF1-205ENST00000533464 HARSP12081 509 aaKnown RBP19.59■□□□□ 0.73
PHRF1-205ENST00000533464 LRMPQ12912 555 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 KRBA2Q6ZNG9 492 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 FNBP1Q96RU3 617 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 ZNF804BA4D1E1 1349 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 ELF2Q15723 593 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 SLC9C1Q4G0N8 1177 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 HDXQ7Z353 690 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 GPKOWQ92917 476 aaPredicted RBP eCLIP19.59■□□□□ 0.73
PHRF1-205ENST00000533464 OGFRQ9NZT2 677 aa19.59■□□□□ 0.73
PHRF1-205ENST00000533464 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.73
PHRF1-205ENST00000533464 TNFAIP3P21580 790 aa19.58■□□□□ 0.73
PHRF1-205ENST00000533464 ATP2B4P23634 1241 aa19.58■□□□□ 0.73
PHRF1-205ENST00000533464 MAGEA1P43355 309 aa19.58■□□□□ 0.73
PHRF1-205ENST00000533464 MAP3K4Q9Y6R4 1608 aa19.58■□□□□ 0.73
PHRF1-205ENST00000533464 CDC42BPAQ5VT25 1732 aa19.58■□□□□ 0.73
PHRF1-205ENST00000533464 RTEL1Q9NZ71 1219 aa19.58■□□□□ 0.73
PHRF1-205ENST00000533464 TLDC2A0PJX2 215 aa19.58■□□□□ 0.72
PHRF1-205ENST00000533464 RNASE9P60153 205 aaKnown RBP19.58■□□□□ 0.72
PHRF1-205ENST00000533464 CCDC84Q86UT8 332 aaPredicted RBP19.58■□□□□ 0.72
PHRF1-205ENST00000533464 APBA3O96018 575 aa19.58■□□□□ 0.72
PHRF1-205ENST00000533464 CEP83Q9Y592 693 aa19.58■□□□□ 0.72
PHRF1-205ENST00000533464 ASIC2Q16515 512 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 ADD2P35612 726 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 TERF1P54274 439 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 SECISBP2LQ93073 1101 aaKnown RBP19.57■□□□□ 0.72
PHRF1-205ENST00000533464 PAIP2Q9BPZ3 127 aaKnown RBP19.57■□□□□ 0.72
PHRF1-205ENST00000533464 PUS7LQ9H0K6 701 aaKnown RBP19.57■□□□□ 0.72
PHRF1-205ENST00000533464 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-205ENST00000533464 BTDP43251 543 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 DLGAP5Q15398 846 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 CFAP58Q5T655 872 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 NSMFQ6X4W1 530 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 FAM207AQ9NSI2 230 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-205ENST00000533464 IVLP07476 585 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 KRT5P13647 590 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
PHRF1-205ENST00000533464 MYCT1Q8N699 235 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 TIGD1Q96MW7 591 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 INCENPQ9NQS7 918 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 ATP8A2Q9NTI2 1148 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 FANCLQ9NW38 375 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 TRPM1Q7Z4N2 1603 aa19.57■□□□□ 0.72
PHRF1-205ENST00000533464 CHD1O14646 1710 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 ATP2A1O14983 1001 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 LARGE1O95461 756 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 TUBB2AQ13885 445 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 TUBB2BQ9BVA1 445 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 MTUS1Q9ULD2 1270 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-205ENST00000533464 DDAH1O94760 285 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 TECP42680 631 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 SCNN1DP51172 638 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 NCBP1Q09161 790 aaKnown RBP19.56■□□□□ 0.72
PHRF1-205ENST00000533464 LRRC47Q8N1G4 583 aaKnown RBP19.56■□□□□ 0.72
PHRF1-205ENST00000533464 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 A0A1W2PQ27 194 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 A0A1W2PQ64 194 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 A0A1W2PQD8 194 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms