RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PI16Q6UXB8 463 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 LBX2Q6XYB7 198 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 SPATA5Q8NB90 893 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 ARRDC4Q8NCT1 418 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 TRIM43Q96BQ3 446 aaPredicted RBP9.63□□□□□ -0.87
NXF1-215ENST00000533440 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
NXF1-215ENST00000533440 PDLIM7Q9NR12 457 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 FLT1P17948 1338 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L15C9J2P7 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L13C9JLJ4 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L11C9JVI0 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L18D6R9N7 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L22D6RA61 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L17D6RBQ6 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L19D6RCP7 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L20D6RJB6 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
NXF1-215ENST00000533440 PPP4CP60510 307 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP17L24Q0WX57 530 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 TFCP2Q12800 502 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 POLA2Q14181 598 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 SH3RF1Q7Z6J0 888 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 USP38Q8NB14 1042 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 PRDM5Q9NQX1 630 aaPredicted RBP9.62□□□□□ -0.87
NXF1-215ENST00000533440 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 BTBD7Q9P203 1132 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 HDAC5Q9UQL6 1122 aa9.62□□□□□ -0.87
NXF1-215ENST00000533440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
NXF1-215ENST00000533440 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 SEPT4O43236 478 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 BAG3O95817 575 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 PLCG2P16885 1265 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 MCAMP43121 646 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 GRIN2CQ14957 1233 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 ALDH1L2Q3SY69 923 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 WDR78Q5VTH9 848 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 OLFML2BQ68BL8 750 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 CRACR2BQ8N4Y2 399 aaPredicted RBP9.61□□□□□ -0.87
NXF1-215ENST00000533440 TGFBRAP1Q8WUH2 860 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 AATFQ9NY61 560 aaKnown RBP eCLIP9.61□□□□□ -0.87
NXF1-215ENST00000533440 PALD1Q9ULE6 856 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 FOCADQ5VW36 1801 aa9.61□□□□□ -0.87
NXF1-215ENST00000533440 CDK5RAP2Q96SN8 1893 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
NXF1-215ENST00000533440 GH2P01242 217 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 ITGB8P26012 769 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 ADCYAP1R1P41586 468 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 USP14P54578 494 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 EPHB4P54760 987 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 LRRC41Q15345 812 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 NAA16Q6N069 864 aaPredicted RBP9.6□□□□□ -0.87
NXF1-215ENST00000533440 NEUROD6Q96NK8 337 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
NXF1-215ENST00000533440 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 KIAA1683Q9H0B3 1180 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 LRP2BPQ9P2M1 347 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 RAPGEFL1Q9UHV5 662 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 ZNF236Q9UL36 1845 aa9.6□□□□□ -0.87
NXF1-215ENST00000533440 NCOR1O75376 2440 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 STRNO43815 780 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 HLA-DOAP06340 250 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 UQCRFS1P1P0C7P4 283 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 VCAM1P19320 739 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 ADORA2AP29274 412 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 PLA2G5P39877 138 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 TLE2Q04725 743 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 MTX1Q13505 466 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 ZYXQ15942 572 aaKnown RBP9.59□□□□□ -0.87
NXF1-215ENST00000533440 ANO1Q5XXA6 986 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 TATDN1Q6P1N9 297 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 ADGRA1Q86SQ6 560 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 DPP9Q86TI2 863 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 RNPC3Q96LT9 517 aaKnown RBP9.59□□□□□ -0.87
NXF1-215ENST00000533440 MEIS3Q99687 375 aa9.59□□□□□ -0.87
NXF1-215ENST00000533440 XIRP2A4UGR9 3374 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
NXF1-215ENST00000533440 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
NXF1-215ENST00000533440 E9PSI1 815 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 KIAA0355O15063 1070 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 SRGAP3O43295 1099 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 IGSF3O75054 1194 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 COBLO75128 1261 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 CLTBP09497 229 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 DNAJB2P25686 324 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 DSG3P32926 999 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 ATF7IPQ6VMQ6 1270 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 SHCBP1Q8NEM2 672 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 ACER1Q8TDN7 264 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 ATXN2LQ8WWM7 1075 aaKnown RBP9.58□□□□□ -0.88
NXF1-215ENST00000533440 FERMT2Q96AC1 680 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 FEZ1Q99689 392 aa9.58□□□□□ -0.88
NXF1-215ENST00000533440 MOV10L1Q9BXT6 1211 aaKnown RBP9.58□□□□□ -0.88
NXF1-215ENST00000533440 ZNF576Q9H609 170 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms