RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 TTC6Q86TZ1 520 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 PNMA1Q8ND90 353 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 KAT14Q9H8E8 782 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 VPS54Q9P1Q0 977 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 FZD1Q9UP38 647 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 FRMPD2Q68DX3 1309 aaPredicted RBP15.69■□□□□ 0.1
CDC27-210ENST00000533415 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 GABPAQ06546 454 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 SSRP1Q08945 709 aaKnown RBP15.69■□□□□ 0.1
CDC27-210ENST00000533415 PRAMEF18Q5VWM3 479 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 CIAPIN1Q6FI81 312 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
CDC27-210ENST00000533415 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
CDC27-210ENST00000533415 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.69■□□□□ 0.1
CDC27-210ENST00000533415 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
CDC27-210ENST00000533415 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
CDC27-210ENST00000533415 NOM1Q5C9Z4 860 aaKnown RBP15.68■□□□□ 0.1
CDC27-210ENST00000533415 CCDC84Q86UT8 332 aaPredicted RBP15.68■□□□□ 0.1
CDC27-210ENST00000533415 OGFOD1Q8N543 542 aa15.68■□□□□ 0.1
CDC27-210ENST00000533415 KRT40Q6A162 431 aa15.68■□□□□ 0.1
CDC27-210ENST00000533415 OXER1Q8TDS5 423 aa15.68■□□□□ 0.1
CDC27-210ENST00000533415 VAT1LQ9HCJ6 419 aa15.68■□□□□ 0.1
CDC27-210ENST00000533415 ZNF70Q9UC06 446 aaPredicted RBP15.68■□□□□ 0.1
CDC27-210ENST00000533415 GMPSP49915 693 aaPredicted RBP15.67■□□□□ 0.1
CDC27-210ENST00000533415 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
CDC27-210ENST00000533415 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 FBXO18Q8NFZ0 1043 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 GPKOWQ92917 476 aaPredicted RBP eCLIP15.67■□□□□ 0.1
CDC27-210ENST00000533415 USP28Q96RU2 1077 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 UBA5Q9GZZ9 404 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 CLIP2Q9UDT6 1046 aa15.67■□□□□ 0.1
CDC27-210ENST00000533415 FER1L6Q2WGJ9 1857 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 USP17L5A8MUK1 530 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 FMNL1O95466 1100 aaPredicted RBP15.66■□□□□ 0.1
CDC27-210ENST00000533415 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
CDC27-210ENST00000533415 FUT2Q10981 343 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 NR5A1Q13285 461 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 CSRNP1Q96S65 589 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 WNT10BO00744 389 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 IFNAR1P17181 557 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
CDC27-210ENST00000533415 PKN1Q16512 942 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 ECM29Q5VYK3 1845 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
CDC27-210ENST00000533415 FKBP1AP62942 108 aaKnown RBP15.65■□□□□ 0.1
CDC27-210ENST00000533415 SOGA3Q5TF21 947 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 CPLX2Q6PUV4 134 aaKnown RBP15.65■□□□□ 0.1
CDC27-210ENST00000533415 MICALL2Q8IY33 904 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 TMTC2Q8N394 836 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 NEDD1Q8NHV4 660 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 SYT17Q9BSW7 474 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 FOCADQ5VW36 1801 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 BTBD18B2RXH4 712 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 HLA-DOAP06340 250 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 GSE1Q14687 1217 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 TMED8Q6PL24 325 aaPredicted RBP15.65■□□□□ 0.1
CDC27-210ENST00000533415 TMTC3Q6ZXV5 915 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 HOMER1Q86YM7 354 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
CDC27-210ENST00000533415 MYOZ2Q9NPC6 264 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 CLIC4Q9Y696 253 aa15.65■□□□□ 0.1
CDC27-210ENST00000533415 PCP11498 1178 aaKnown RBP15.64■□□□□ 0.09
CDC27-210ENST00000533415 KIF23Q02241 960 aaPredicted RBP15.64■□□□□ 0.09
CDC27-210ENST00000533415 SEPT2Q15019 361 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 GPCPD1Q9NPB8 672 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 MAD2L2Q9UI95 211 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 CNTNAP1P78357 1384 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 CNTNAP5Q8WYK1 1306 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 CYTH3O43739 400 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 TAL1P17542 331 aaPredicted RBP15.64■□□□□ 0.09
CDC27-210ENST00000533415 EARS2Q5JPH6 523 aaKnown RBP15.64■□□□□ 0.09
CDC27-210ENST00000533415 IDI2Q9BXS1 227 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 SIPA1L1O43166 1804 aa15.64■□□□□ 0.09
CDC27-210ENST00000533415 CDKL5O76039 1030 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 TTBK2Q6IQ55 1244 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 GAS2L3Q86XJ1 694 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 LEO1Q8WVC0 666 aaPredicted RBP15.63■□□□□ 0.09
CDC27-210ENST00000533415 SPATA32Q96LK8 384 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 TRIM34Q9BYJ4 488 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 HDAC9Q9UKV0 1011 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 SLC16A2P36021 539 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 SNAP25P60880 206 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 KRT85P78386 507 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 HDLBPQ00341 1268 aaKnown RBP15.63■□□□□ 0.09
CDC27-210ENST00000533415 CERS3Q8IU89 383 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 TRIM22Q8IYM9 498 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 NUP88Q99567 741 aaPredicted RBP15.63■□□□□ 0.09
CDC27-210ENST00000533415 MTMR4Q9NYA4 1195 aa15.63■□□□□ 0.09
CDC27-210ENST00000533415 CNOT7Q9UIV1 285 aaKnown RBP15.63■□□□□ 0.09
CDC27-210ENST00000533415 GNL2Q13823 731 aaKnown RBP15.62■□□□□ 0.09
CDC27-210ENST00000533415 CERKLQ49MI3 558 aaPredicted RBP15.62■□□□□ 0.09
CDC27-210ENST00000533415 KCTD1Q719H9 257 aa15.62■□□□□ 0.09
CDC27-210ENST00000533415 DGKHQ86XP1 1220 aa15.62■□□□□ 0.09
CDC27-210ENST00000533415 PI4KBQ9UBF8 816 aa15.62■□□□□ 0.09
CDC27-210ENST00000533415 MRVI1Q9Y6F6 885 aa15.62■□□□□ 0.09
CDC27-210ENST00000533415 DDAH1O94760 285 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms