RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 TPCN1Q9ULQ1 816 aa16.54■□□□□ 0.24
HIF3A-215ENST00000533145 DOCK1Q14185 1865 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 NMT2O60551 498 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-215ENST00000533145 HSPA6P17066 643 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 NF2P35240 595 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 JAG1P78504 1218 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 APOBRQ0VD83 1088 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 IFIT1BQ5T764 474 aaKnown RBP16.53■□□□□ 0.24
HIF3A-215ENST00000533145 MKL1Q969V6 931 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 GLIS2Q9BZE0 524 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-215ENST00000533145 SENP2Q9HC62 589 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 PAPPA2Q9BXP8 1791 aa16.53■□□□□ 0.24
HIF3A-215ENST00000533145 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-215ENST00000533145 GH2P01242 217 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 ASNSP08243 561 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.24
HIF3A-215ENST00000533145 CUL4AQ13619 759 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 ME3Q16798 604 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-215ENST00000533145 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 MAP3K14Q99558 947 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.24
HIF3A-215ENST00000533145 NID2Q14112 1375 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
HIF3A-215ENST00000533145 PFKFB2O60825 505 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 GDF11O95390 407 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 TTLL1O95922 423 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
HIF3A-215ENST00000533145 SEPT2Q15019 361 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 NOL9Q5SY16 702 aaKnown RBP16.51■□□□□ 0.23
HIF3A-215ENST00000533145 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
HIF3A-215ENST00000533145 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
HIF3A-215ENST00000533145 TMEM47Q9BQJ4 181 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
HIF3A-215ENST00000533145 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
HIF3A-215ENST00000533145 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 UNCXA6NJT0 531 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 CALM1P0DP23 149 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 CALM2P0DP24 149 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 CALM3P0DP25 149 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 TROAPQ12815 778 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 SHROOM1Q2M3G4 852 aaPredicted RBP16.5■□□□□ 0.23
HIF3A-215ENST00000533145 DLK2Q6UY11 383 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 SYNE3Q6ZMZ3 975 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 HPS5Q9UPZ3 1129 aa16.5■□□□□ 0.23
HIF3A-215ENST00000533145 PHIPQ8WWQ0 1821 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 ZBTB43O43298 467 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 DDAH1O94760 285 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 LARGE1O95461 756 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-215ENST00000533145 INPP5BP32019 993 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 IREB2P48200 963 aaKnown RBP16.49■□□□□ 0.23
HIF3A-215ENST00000533145 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
HIF3A-215ENST00000533145 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 SCYL3Q8IZE3 742 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 PNMA1Q8ND90 353 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
HIF3A-215ENST00000533145 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-215ENST00000533145 CLIP2Q9UDT6 1046 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 OTOFQ9HC10 1997 aa16.49■□□□□ 0.23
HIF3A-215ENST00000533145 KIF3CO14782 793 aa16.48■□□□□ 0.23
HIF3A-215ENST00000533145 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
HIF3A-215ENST00000533145 FKBP1BP68106 108 aa16.48■□□□□ 0.23
HIF3A-215ENST00000533145 ICA1Q05084 483 aa16.48■□□□□ 0.23
HIF3A-215ENST00000533145 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
HIF3A-215ENST00000533145 GTF3C6Q969F1 213 aa16.48■□□□□ 0.23
HIF3A-215ENST00000533145 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 ST3GAL1Q11201 340 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 SCRN1Q12765 414 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-215ENST00000533145 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 WDR18Q9BV38 432 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 FAM217BQ9NTX9 383 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-215ENST00000533145 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
HIF3A-215ENST00000533145 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 TRAF5O00463 557 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
HIF3A-215ENST00000533145 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 PTPRAP18433 802 aa16.46■□□□□ 0.23
HIF3A-215ENST00000533145 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
HIF3A-215ENST00000533145 LDLRAD1Q5T700 205 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms