RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 FPGT-TNNI3KV9GXZ4 949 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 FOCADQ5VW36 1801 aa14.1□□□□□ -0.15
CMTM1-216ENST00000533078 SIPA1L1O43166 1804 aa14.09□□□□□ -0.15
CMTM1-216ENST00000533078 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
CMTM1-216ENST00000533078 PEX10O60683 326 aa14.09□□□□□ -0.15
CMTM1-216ENST00000533078 IDH1O75874 414 aaKnown RBP14.09□□□□□ -0.15
CMTM1-216ENST00000533078 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
CMTM1-216ENST00000533078 TTC6Q86TZ1 520 aa14.09□□□□□ -0.15
CMTM1-216ENST00000533078 ZNF512BQ96KM6 892 aaPredicted RBP14.09□□□□□ -0.15
CMTM1-216ENST00000533078 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
CMTM1-216ENST00000533078 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
CMTM1-216ENST00000533078 SERPINB13Q9UIV8 391 aa14.09□□□□□ -0.15
CMTM1-216ENST00000533078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.09□□□□□ -0.15
CMTM1-216ENST00000533078 CDK5RAP2Q96SN8 1893 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 DNM1LO00429 736 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 SURF6O75683 361 aaKnown RBP14.08□□□□□ -0.16
CMTM1-216ENST00000533078 TRIM27P14373 513 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 PTPREP23469 700 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 ZAP70P43403 619 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 ABCB5Q2M3G0 1257 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 CERKLQ49MI3 558 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-216ENST00000533078 FAM109BQ6ICB4 259 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-216ENST00000533078 TMED8Q6PL24 325 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-216ENST00000533078 LPAR1Q92633 364 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 DBNDD2Q9BQY9 259 aa14.08□□□□□ -0.16
CMTM1-216ENST00000533078 MYH1P12882 1939 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 VCANP13611 3396 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 KBTBD13C9JR72 458 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
CMTM1-216ENST00000533078 JAG1P78504 1218 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 MAP3K12Q12852 859 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 SHROOM1Q2M3G4 852 aaPredicted RBP14.07□□□□□ -0.16
CMTM1-216ENST00000533078 ZNF697Q5TEC3 545 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 CATSPERGQ6ZRH7 1159 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 ADGRA1Q86SQ6 560 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 DPP9Q86TI2 863 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 ARRDC4Q8NCT1 418 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 CLUAP1Q96AJ1 413 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 KIAA1683Q9H0B3 1180 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 EHD4Q9H223 541 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 SLC5A4Q9NY91 659 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
CMTM1-216ENST00000533078 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 HOXC6P09630 235 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 VCAM1P19320 739 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 DYNLL1P63167 89 aaKnown RBP14.06□□□□□ -0.16
CMTM1-216ENST00000533078 GRB14Q14449 540 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 TATDN1Q6P1N9 297 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
CMTM1-216ENST00000533078 MAGEB6Q8N7X4 407 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 MIGA1Q8NAN2 632 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 FRMPD3Q5JV73 1810 aa14.06□□□□□ -0.16
CMTM1-216ENST00000533078 POLR3DP05423 398 aaPredicted RBP14.05□□□□□ -0.16
CMTM1-216ENST00000533078 FTSJ3Q8IY81 847 aaKnown RBP14.05□□□□□ -0.16
CMTM1-216ENST00000533078 RPAP3Q9H6T3 665 aaPredicted RBP14.05□□□□□ -0.16
CMTM1-216ENST00000533078 PIH1D3Q9NQM4 214 aaKnown RBP14.05□□□□□ -0.16
CMTM1-216ENST00000533078 HOXC10Q9NYD6 342 aa14.05□□□□□ -0.16
CMTM1-216ENST00000533078 ATP11BQ9Y2G3 1177 aa14.05□□□□□ -0.16
CMTM1-216ENST00000533078 MPHOSPH10O00566 681 aaKnown RBP14.04□□□□□ -0.16
CMTM1-216ENST00000533078 STRNO43815 780 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 CNMDO75829 334 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
CMTM1-216ENST00000533078 CYP2C19P33261 490 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 RTP1P59025 263 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 POLA2Q14181 598 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 ZKSCAN2Q63HK3 967 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 SSH3Q8TE77 659 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 TANGO6Q9C0B7 1094 aa14.04□□□□□ -0.16
CMTM1-216ENST00000533078 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
CMTM1-216ENST00000533078 SPDYE16A6NNV3 312 aaPredicted RBP14.03□□□□□ -0.16
CMTM1-216ENST00000533078 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
CMTM1-216ENST00000533078 ATP8B2P98198 1209 aa14.03□□□□□ -0.16
CMTM1-216ENST00000533078 OLFML2BQ68BL8 750 aa14.03□□□□□ -0.16
CMTM1-216ENST00000533078 TMEM57Q8N5G2 664 aa14.03□□□□□ -0.16
CMTM1-216ENST00000533078 MB21D1Q8N884 522 aa14.03□□□□□ -0.16
CMTM1-216ENST00000533078 CCDC8Q9H0W5 538 aaPredicted RBP14.03□□□□□ -0.16
CMTM1-216ENST00000533078 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
CMTM1-216ENST00000533078 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
CMTM1-216ENST00000533078 MYO5AQ9Y4I1 1855 aaKnown RBP14.03□□□□□ -0.16
CMTM1-216ENST00000533078 PRUNE2Q8WUY3 3088 aa14.02□□□□□ -0.16
CMTM1-216ENST00000533078 BCAR3O75815 825 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 ADORA2AP29274 412 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 COG2Q14746 738 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 TTF1Q15361 905 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-216ENST00000533078 GJC2Q5T442 439 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-216ENST00000533078 ERC1Q8IUD2 1116 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 ACER1Q8TDN7 264 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-216ENST00000533078 CRNKL1Q9BZJ0 848 aaKnown RBP14.02□□□□□ -0.17
CMTM1-216ENST00000533078 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 BTBD7Q9P203 1132 aa14.02□□□□□ -0.17
CMTM1-216ENST00000533078 CDH23Q9H251 3354 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 SEPT4O43236 478 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 CYBAP13498 195 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 PLS1Q14651 629 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 SHCBP1Q8NEM2 672 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 NPLOC4Q8TAT6 608 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms