RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 KAT14Q9H8E8 782 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
TRIM3-212ENST00000533064 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 SSC5DA1L4H1 1573 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
TRIM3-212ENST00000533064 TTLL1O95922 423 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 GH2P01242 217 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 ASNSP08243 561 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 CATIPQ7Z7H3 387 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
TRIM3-212ENST00000533064 WRNIP1Q96S55 665 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
TRIM3-212ENST00000533064 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
TRIM3-212ENST00000533064 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
TRIM3-212ENST00000533064 EVCP57679 992 aa16.64■□□□□ 0.25
TRIM3-212ENST00000533064 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
TRIM3-212ENST00000533064 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
TRIM3-212ENST00000533064 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
TRIM3-212ENST00000533064 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 GOLGA8BA8MQT2 603 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 ZBTB43O43298 467 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 IREB2P48200 963 aaKnown RBP16.63■□□□□ 0.25
TRIM3-212ENST00000533064 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 ICA1Q05084 483 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 STK3Q13188 491 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 PRKG1Q13976 671 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 TTLL12Q14166 644 aaPredicted RBP16.63■□□□□ 0.25
TRIM3-212ENST00000533064 SEPT2Q15019 361 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 APOA5Q6Q788 366 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 ANKS1AQ92625 1134 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRIM3-212ENST00000533064 PTPRFP10586 1907 aa16.63■□□□□ 0.25
TRIM3-212ENST00000533064 CALM1P0DP23 149 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 CALM2P0DP24 149 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 CALM3P0DP25 149 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
TRIM3-212ENST00000533064 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
TRIM3-212ENST00000533064 ME3Q16798 604 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 CHADLQ6NUI6 762 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 KLRG1Q96E93 195 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 CLIP2Q9UDT6 1046 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
TRIM3-212ENST00000533064 METAP2P50579 478 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM3-212ENST00000533064 RCAN1P53805 252 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 DLK2Q6UY11 383 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 NYAP2Q9P242 653 aa16.62■□□□□ 0.25
TRIM3-212ENST00000533064 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
TRIM3-212ENST00000533064 PFKFB2O60825 505 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 USP2O75604 605 aaPredicted RBP16.61■□□□□ 0.25
TRIM3-212ENST00000533064 DDAH1O94760 285 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 LARGE1O95461 756 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 INPP5BP32019 993 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 NOVP48745 357 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
TRIM3-212ENST00000533064 SCYL3Q8IZE3 742 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 NUP133Q8WUM0 1156 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 CSADQ9Y600 493 aa16.61■□□□□ 0.25
TRIM3-212ENST00000533064 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
TRIM3-212ENST00000533064 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 CCDC83Q8IWF9 413 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRIM3-212ENST00000533064 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 FZD1Q9UP38 647 aa16.6■□□□□ 0.25
TRIM3-212ENST00000533064 CCDC196A0A1B0GTZ2 297 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 DDIT3P35638 169 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
TRIM3-212ENST00000533064 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 RAB11FIP4Q86YS3 637 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
TRIM3-212ENST00000533064 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
TRIM3-212ENST00000533064 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
TRIM3-212ENST00000533064 USP17L5A8MUK1 530 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 TRAF5O00463 557 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 CPLX1O14810 134 aa16.59■□□□□ 0.25
TRIM3-212ENST00000533064 JAG1P78504 1218 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms