RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 FANCBQ8NB91 859 aa23.73■■□□□ 1.39
GSDMD-212ENST00000533063 TMEM47Q9BQJ4 181 aa23.73■■□□□ 1.39
GSDMD-212ENST00000533063 DHX16O60231 1041 aaKnown RBP23.72■■□□□ 1.39
GSDMD-212ENST00000533063 BRD1O95696 1058 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 JAG1P78504 1218 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 CCDC178Q5BJE1 867 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 CATIPQ7Z7H3 387 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 NUP133Q8WUM0 1156 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 MTMR4Q9NYA4 1195 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 HERC5Q9UII4 1024 aaKnown RBP23.72■■□□□ 1.39
GSDMD-212ENST00000533063 STX8Q9UNK0 236 aa23.72■■□□□ 1.39
GSDMD-212ENST00000533063 DDAH1O94760 285 aa23.71■■□□□ 1.39
GSDMD-212ENST00000533063 MAP3K10Q02779 954 aa23.71■■□□□ 1.39
GSDMD-212ENST00000533063 RTN1Q16799 776 aa23.71■■□□□ 1.39
GSDMD-212ENST00000533063 CERKLQ49MI3 558 aaPredicted RBP23.71■■□□□ 1.39
GSDMD-212ENST00000533063 TNPO1Q92973 898 aaKnown RBP23.71■■□□□ 1.39
GSDMD-212ENST00000533063 CCDC17Q96LX7 622 aa23.71■■□□□ 1.39
GSDMD-212ENST00000533063 TNFAIP1Q13829 316 aa23.7■■□□□ 1.39
GSDMD-212ENST00000533063 PNMA1Q8ND90 353 aa23.7■■□□□ 1.39
GSDMD-212ENST00000533063 CPLX1O14810 134 aa23.7■■□□□ 1.38
GSDMD-212ENST00000533063 TNNI2P48788 182 aa23.7■■□□□ 1.38
GSDMD-212ENST00000533063 ANGEL2Q5VTE6 544 aaKnown RBP23.7■■□□□ 1.38
GSDMD-212ENST00000533063 CHMP4CQ96CF2 233 aa23.7■■□□□ 1.38
GSDMD-212ENST00000533063 L3MBTL3Q96JM7 780 aaPredicted RBP23.7■■□□□ 1.38
GSDMD-212ENST00000533063 DEFB129Q9H1M3 183 aa23.7■■□□□ 1.38
GSDMD-212ENST00000533063 KAT14Q9H8E8 782 aa23.7■■□□□ 1.38
GSDMD-212ENST00000533063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.7■■□□□ 1.38
GSDMD-212ENST00000533063 ZC3H4Q9UPT8 1303 aaKnown RBP23.7■■□□□ 1.38
GSDMD-212ENST00000533063 MYH6P13533 1939 aa23.69■■□□□ 1.38
GSDMD-212ENST00000533063 STX6O43752 255 aa23.69■■□□□ 1.38
GSDMD-212ENST00000533063 TBC1D12O60347 775 aa23.69■■□□□ 1.38
GSDMD-212ENST00000533063 GUCY1A2P33402 732 aa23.69■■□□□ 1.38
GSDMD-212ENST00000533063 HMGN5P82970 282 aaKnown RBP23.69■■□□□ 1.38
GSDMD-212ENST00000533063 TRIM34Q9BYJ4 488 aa23.69■■□□□ 1.38
GSDMD-212ENST00000533063 BAZ2BQ9UIF8 2168 aaKnown RBP23.68■■□□□ 1.38
GSDMD-212ENST00000533063 GDF11O95390 407 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 MIGA2Q7L4E1 593 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 NBPF11Q86T75 865 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 CMTR1Q8N1G2 835 aaKnown RBP23.68■■□□□ 1.38
GSDMD-212ENST00000533063 PHKBQ93100 1093 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 ADARB2Q9NS39 739 aaKnown RBP23.68■■□□□ 1.38
GSDMD-212ENST00000533063 MTMR6Q9Y217 621 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 MPHOSPH10O00566 681 aaKnown RBP23.68■■□□□ 1.38
GSDMD-212ENST00000533063 CALM1P0DP23 149 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 CALM2P0DP24 149 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 CALM3P0DP25 149 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 IFNAR1P17181 557 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 FUT2Q10981 343 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 LARP1BQ659C4 914 aaKnown RBP23.68■■□□□ 1.38
GSDMD-212ENST00000533063 RASGRP2Q7LDG7 609 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 GGA3Q9NZ52 723 aa23.68■■□□□ 1.38
GSDMD-212ENST00000533063 TOP1P11387 765 aaKnown RBP23.67■■□□□ 1.38
GSDMD-212ENST00000533063 DPY19L2Q6NUT2 758 aa23.67■■□□□ 1.38
GSDMD-212ENST00000533063 UBE2Q2LH0YL09 131 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 LMOD1P29536 600 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-212ENST00000533063 PPP2R5BQ15173 497 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 FOXD4L5Q5VV16 416 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-212ENST00000533063 SIAH1Q8IUQ4 282 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 FOXD4L4Q8WXT5 416 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-212ENST00000533063 ATAD5Q96QE3 1844 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 SCN4AP35499 1836 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 CCDC196A0A1B0GTZ2 297 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 GLTPD2A6NH11 291 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 PLEKHA8P1O95397 391 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 TTLL1O95922 423 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 ABCB5Q2M3G0 1257 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 MAP3K14Q99558 947 aa23.66■■□□□ 1.38
GSDMD-212ENST00000533063 ORC3Q9UBD5 711 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-212ENST00000533063 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
GSDMD-212ENST00000533063 CDKL5O76039 1030 aa23.65■■□□□ 1.38
GSDMD-212ENST00000533063 PDCP20941 246 aa23.65■■□□□ 1.38
GSDMD-212ENST00000533063 SEPT2Q15019 361 aa23.65■■□□□ 1.38
GSDMD-212ENST00000533063 APOBEC3FQ8IUX4 373 aaKnown RBP23.65■■□□□ 1.38
GSDMD-212ENST00000533063 GH2P01242 217 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 ZSCAN22P10073 491 aaPredicted RBP23.64■■□□□ 1.38
GSDMD-212ENST00000533063 GRM4Q14833 912 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 NBPF12Q5TAG4 269 aaPredicted RBP23.64■■□□□ 1.38
GSDMD-212ENST00000533063 TMEM179Q6ZVK1 233 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 TMTC3Q6ZXV5 915 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 CDC37L1Q7L3B6 337 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 STAG2Q8N3U4 1231 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 FAM184AQ8NB25 1140 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 RBM28Q9NW13 759 aaKnown RBP23.64■■□□□ 1.38
GSDMD-212ENST00000533063 CLIP2Q9UDT6 1046 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 MAD2L2Q9UI95 211 aa23.64■■□□□ 1.38
GSDMD-212ENST00000533063 STK36Q9NRP7 1315 aa23.64■■□□□ 1.37
GSDMD-212ENST00000533063 PHF20L1A8MW92 1017 aa23.63■■□□□ 1.37
GSDMD-212ENST00000533063 FMNL1O95466 1100 aaPredicted RBP23.63■■□□□ 1.37
GSDMD-212ENST00000533063 CPLX2Q6PUV4 134 aaKnown RBP23.63■■□□□ 1.37
GSDMD-212ENST00000533063 LRRC47Q8N1G4 583 aaKnown RBP23.63■■□□□ 1.37
GSDMD-212ENST00000533063 CCDC82Q8N4S0 544 aa23.63■■□□□ 1.37
GSDMD-212ENST00000533063 AIFM3Q96NN9 605 aa23.63■■□□□ 1.37
GSDMD-212ENST00000533063 TCHHQ07283 1943 aa23.63■■□□□ 1.37
GSDMD-212ENST00000533063 SRBD1Q8N5C6 995 aaKnown RBP23.63■■□□□ 1.37
GSDMD-212ENST00000533063 CTCFLQ8NI51 663 aaPredicted RBP23.63■■□□□ 1.37
GSDMD-212ENST00000533063 CHAMP1Q96JM3 812 aa23.63■■□□□ 1.37
GSDMD-212ENST00000533063 KANSL2Q9H9L4 492 aa23.63■■□□□ 1.37
GSDMD-212ENST00000533063 WDR90Q96KV7 1748 aa23.62■■□□□ 1.37
GSDMD-212ENST00000533063 PITPNM2Q9BZ72 1349 aa23.62■■□□□ 1.37
GSDMD-212ENST00000533063 VPS37CA5D8V6 355 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms