RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 USP17L22D6RA61 530 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 USP17L17D6RBQ6 530 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 USP17L19D6RCP7 530 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 USP17L20D6RJB6 530 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 MPHOSPH10O00566 681 aaKnown RBP18.45■□□□□ 0.54
BRPF3-210ENST00000532538 USP17L24Q0WX57 530 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 TTF1Q15361 905 aaPredicted RBP18.45■□□□□ 0.54
BRPF3-210ENST00000532538 Q3C1V9 767 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 GPR142Q7Z601 462 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 PORCNQ9H237 461 aa18.45■□□□□ 0.54
BRPF3-210ENST00000532538 SYN1P17600 705 aa18.44■□□□□ 0.54
BRPF3-210ENST00000532538 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
BRPF3-210ENST00000532538 IVNS1ABPQ9Y6Y0 642 aa18.44■□□□□ 0.54
BRPF3-210ENST00000532538 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
BRPF3-210ENST00000532538 XRCC5P13010 732 aaKnown RBP18.43■□□□□ 0.54
BRPF3-210ENST00000532538 CLASRPQ8N2M8 674 aaKnown RBP18.43■□□□□ 0.54
BRPF3-210ENST00000532538 CRNKL1Q9BZJ0 848 aaKnown RBP18.43■□□□□ 0.54
BRPF3-210ENST00000532538 EHD4Q9H223 541 aa18.43■□□□□ 0.54
BRPF3-210ENST00000532538 FRMPD3Q5JV73 1810 aa18.43■□□□□ 0.54
BRPF3-210ENST00000532538 BAZ2AQ9UIF9 1905 aaKnown RBP18.43■□□□□ 0.54
BRPF3-210ENST00000532538 A0A1W2PPC1 479 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 MS4A1P11836 297 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 CNGA1P29973 690 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 CACNB2Q08289 660 aaPredicted RBP18.42■□□□□ 0.54
BRPF3-210ENST00000532538 CCL14Q16627 93 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 SLC9C2Q5TAH2 1124 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 MIER1Q8N108 512 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
BRPF3-210ENST00000532538 APBA2Q99767 749 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 MCM9Q9NXL9 1143 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 OGDHLQ9ULD0 1010 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 RABGAP1Q9Y3P9 1069 aa18.42■□□□□ 0.54
BRPF3-210ENST00000532538 CCND3P30281 292 aaPredicted RBP18.41■□□□□ 0.54
BRPF3-210ENST00000532538 PLCD1P51178 756 aa18.41■□□□□ 0.54
BRPF3-210ENST00000532538 MAP2K5Q13163 448 aa18.41■□□□□ 0.54
BRPF3-210ENST00000532538 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
BRPF3-210ENST00000532538 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
BRPF3-210ENST00000532538 CATSPERGQ6ZRH7 1159 aa18.41■□□□□ 0.54
BRPF3-210ENST00000532538 MYH7P12883 1935 aa18.41■□□□□ 0.54
BRPF3-210ENST00000532538 GOLIM4O00461 696 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 HMMRO75330 724 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 VCAM1P19320 739 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 MORN1Q5T089 497 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
BRPF3-210ENST00000532538 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 C12orf42Q96LP6 360 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 KIAA1683Q9H0B3 1180 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 PRO3102Q9H379 93 aa18.4■□□□□ 0.54
BRPF3-210ENST00000532538 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
BRPF3-210ENST00000532538 PDE6AP16499 860 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 SEPT2Q15019 361 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 KIF1BPQ96EK5 621 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 LRCH3Q96II8 777 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 TANGO6Q9C0B7 1094 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
BRPF3-210ENST00000532538 ZNFX1Q9P2E3 1918 aaKnown RBP18.39■□□□□ 0.53
BRPF3-210ENST00000532538 SHMT1P34896 483 aa18.38■□□□□ 0.53
BRPF3-210ENST00000532538 AMOTL1Q8IY63 956 aa18.38■□□□□ 0.53
BRPF3-210ENST00000532538 SDR42E1Q8WUS8 393 aa18.38■□□□□ 0.53
BRPF3-210ENST00000532538 RIOK1Q9BRS2 568 aaKnown RBP18.38■□□□□ 0.53
BRPF3-210ENST00000532538 SLC15A5A6NIM6 579 aa18.37■□□□□ 0.53
BRPF3-210ENST00000532538 SOX1O00570 391 aaPredicted RBP18.37■□□□□ 0.53
BRPF3-210ENST00000532538 PTPREP23469 700 aa18.37■□□□□ 0.53
BRPF3-210ENST00000532538 PLS1Q14651 629 aa18.37■□□□□ 0.53
BRPF3-210ENST00000532538 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
BRPF3-210ENST00000532538 DPP9Q86TI2 863 aa18.37■□□□□ 0.53
BRPF3-210ENST00000532538 USP6NLQ92738 828 aa18.37■□□□□ 0.53
BRPF3-210ENST00000532538 UBE2OQ9C0C9 1292 aaKnown RBP18.37■□□□□ 0.53
BRPF3-210ENST00000532538 CNMDO75829 334 aa18.36■□□□□ 0.53
BRPF3-210ENST00000532538 MAGEA10P43363 369 aaPredicted RBP18.36■□□□□ 0.53
BRPF3-210ENST00000532538 MNX1P50219 401 aaPredicted RBP18.36■□□□□ 0.53
BRPF3-210ENST00000532538 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
BRPF3-210ENST00000532538 GDF15Q99988 308 aa18.36■□□□□ 0.53
BRPF3-210ENST00000532538 BTBD7Q9P203 1132 aa18.36■□□□□ 0.53
BRPF3-210ENST00000532538 PFASO15067 1338 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
BRPF3-210ENST00000532538 MYCNP04198 464 aaPredicted RBP18.35■□□□□ 0.53
BRPF3-210ENST00000532538 BMP8BP34820 402 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 COG2Q14746 738 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 RPAP2Q8IXW5 612 aaPredicted RBP18.35■□□□□ 0.53
BRPF3-210ENST00000532538 LCORLQ8N3X6 602 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 SLC17A8Q8NDX2 589 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
BRPF3-210ENST00000532538 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.35■□□□□ 0.53
BRPF3-210ENST00000532538 BOLA2Q9H3K6 86 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 ARMT1Q9H993 441 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 ARHGEF10LQ9HCE6 1279 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 HOXC10Q9NYD6 342 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 COG6Q9Y2V7 657 aa18.35■□□□□ 0.53
BRPF3-210ENST00000532538 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
BRPF3-210ENST00000532538 RAD21O60216 631 aa18.34■□□□□ 0.53
BRPF3-210ENST00000532538 CYP2D6P10635 497 aa18.34■□□□□ 0.53
BRPF3-210ENST00000532538 POTEEQ6S8J3 1075 aa18.34■□□□□ 0.53
BRPF3-210ENST00000532538 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms