RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 SMARCA1P28370 1054 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 TDO2P48775 406 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 PLCD1P51178 756 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 DPYDQ12882 1025 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 PNOCQ13519 176 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 TRIM65Q6PJ69 517 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 NFXL1Q6ZNB6 911 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 CERKQ8TCT0 537 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 ERO1AQ96HE7 468 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 GSDMAQ96QA5 445 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 UBE2Q2LH0YL09 131 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 PDE4BQ07343 736 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 PTPN14Q15678 1187 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 CCDC178Q5BJE1 867 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 CAVIN4Q5BKX8 364 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 RCSD1Q6JBY9 416 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 CLIC6Q96NY7 704 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 PCDHB6Q9Y5E3 794 aa6.64□□□□□ -1.35
RDX-213ENST00000532461 STX10O60499 249 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 MARCKSP29966 332 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 KRT2P35908 639 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 FAM193AP78312 1265 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 PFKFB3Q16875 520 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 DNTTIP2Q5QJE6 756 aaKnown RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 UTP14CQ5TAP6 766 aaKnown RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 GALNT17Q6IS24 598 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 DGKHQ86XP1 1220 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 REXO1L1PQ8IX06 675 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 DCP1AQ9NPI6 582 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 LRP2BPQ9P2M1 347 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 CGNQ9P2M7 1197 aaKnown RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 BRWD3Q6RI45 1802 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 MYL1P05976 194 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 XBP1P17861 261 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 FOSBP53539 338 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 ORC2Q13416 577 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 TPD52L1Q16890 204 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 COBLL1Q53SF7 1204 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 CNNM3Q8NE01 707 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 PANX2Q96RD6 677 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 UBAC1Q9BSL1 405 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 MYH4Q9Y623 1939 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 A0A087WWV3 80 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 GOLGA6L9A6NEM1 432 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 ONECUT3O60422 494 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 RXRAP19793 462 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 SFPQP23246 707 aaKnown RBP eCLIP6.63□□□□□ -1.35
RDX-213ENST00000532461 HOXA7P31268 230 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 PLCB2Q00722 1185 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 MECOMQ03112 1051 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 GRIN1Q05586 938 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 TBC1D9BQ66K14 1250 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 PDXDC2PQ6P474 469 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 OLFM4Q6UX06 510 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 CATIPQ7Z7H3 387 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 MPNDQ8N594 471 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 KIF18AQ8NI77 898 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 OXER1Q8TDS5 423 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 C16orf45Q96MC5 204 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 MYL10Q9BUA6 226 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 NAA15Q9BXJ9 866 aaKnown RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
RDX-213ENST00000532461 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
RDX-213ENST00000532461 COL11A2P13942 1736 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 A0A087X0B3 334 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 SNAP23O00161 211 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 ARHGAP6O43182 974 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 ATP1A3P13637 1013 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 H2AFXP16104 143 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 GYG1P46976 350 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 RPS8P62241 208 aaKnown RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 RBM10P98175 930 aaKnown RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 CRY2Q49AN0 593 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 SPTY2D1Q68D10 685 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 NUTM2AQ8IVF1 878 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 DPF2Q92785 391 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 ERCC4Q92889 916 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 FAM163AQ96GL9 167 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 CSRNP2Q9H175 543 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 LEMD3Q9Y2U8 911 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 KLRG2A4D1S0 409 aaPredicted RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 TRIM75PA6NK02 468 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 PPP1R3GB7ZBB8 358 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 LAD1O00515 517 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 PRPHP41219 470 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 UBASH3AP57075 661 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 FMR1Q06787 632 aaKnown RBP eCLIP6.62□□□□□ -1.35
RDX-213ENST00000532461 NR5A1Q13285 461 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 GRM4Q14833 912 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 EARS2Q5JPH6 523 aaKnown RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 C12orf60Q5U649 245 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 SPATA1Q5VX52 437 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 IQCA1Q86XH1 822 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 RAB11FIP4Q86YS3 637 aa6.62□□□□□ -1.35
RDX-213ENST00000532461 SRBD1Q8N5C6 995 aaKnown RBP6.62□□□□□ -1.35
RDX-213ENST00000532461 TC2NQ8N9U0 490 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms