RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CKAP4Q07065 602 aaKnown RBP12.67□□□□□ -0.38
PTPRK-221ENST00000532331 HLFQ16534 295 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-221ENST00000532331 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 AGLP35573 1532 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 ZEB2O60315 1214 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 UBE3CQ15386 1083 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 PTCH1Q13635 1447 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 CYP19A1P11511 503 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-221ENST00000532331 CPA1P15085 419 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 AOC3Q16853 763 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 WDR44Q5JSH3 913 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 METTL13Q8N6R0 699 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-221ENST00000532331 GAS7O60861 476 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 MAEAQ7L5Y9 396 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
PTPRK-221ENST00000532331 GLI2P10070 1586 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 ECE2O60344 883 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 FMNL1O95466 1100 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-221ENST00000532331 PRPHP41219 470 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 TRPC3Q13507 836 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 CALCRLQ16602 461 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 KCNG1Q9UIX4 513 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 CEP152O94986 1710 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 ERICH4A6NGS2 130 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 RRP9O43818 475 aaKnown RBP12.66□□□□□ -0.38
PTPRK-221ENST00000532331 SKILP12757 684 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-221ENST00000532331 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 DNM3Q9UQ16 869 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 E7EWF7 191 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 GDF11O95390 407 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 LMAN1P49257 510 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 NR1I2O75469 434 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
PTPRK-221ENST00000532331 TTC38Q5R3I4 469 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 DDX12PQ92771 950 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 DIS3L2Q8IYB7 885 aaKnown RBP12.66□□□□□ -0.38
PTPRK-221ENST00000532331 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 LLPHQ9BRT6 129 aaKnown RBP12.66□□□□□ -0.38
PTPRK-221ENST00000532331 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
PTPRK-221ENST00000532331 TYRO3Q06418 890 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-221ENST00000532331 PODNQ7Z5L7 613 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 KANSL2Q9H9L4 492 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
PTPRK-221ENST00000532331 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
PTPRK-221ENST00000532331 CTR9Q6PD62 1173 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 MAATS1Q7Z4T9 603 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 RNF169Q8NCN4 708 aa12.65□□□□□ -0.38
PTPRK-221ENST00000532331 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 EPB41P11171 864 aaKnown RBP12.64□□□□□ -0.39
PTPRK-221ENST00000532331 SYT1P21579 422 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-221ENST00000532331 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 TACC1O75410 805 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 KRT83P78385 493 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 UTP14CQ5TAP6 766 aaKnown RBP12.64□□□□□ -0.39
PTPRK-221ENST00000532331 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
PTPRK-221ENST00000532331 TTLL11Q8NHH1 800 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-221ENST00000532331 SORBS3O60504 671 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 STAMBPO95630 424 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 TTLL1O95922 423 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 NFIXQ14938 502 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-221ENST00000532331 PHKBQ93100 1093 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 PALD1Q9ULE6 856 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
PTPRK-221ENST00000532331 TNKSO95271 1327 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 GOLGA1Q92805 767 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 PRIMPOLQ96LW4 560 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 UNC13BO14795 1591 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms