RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SV2BQ7L1I2 683 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 TBC1D16Q8TBP0 767 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 CRAMP1Q96RY5 1269 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 MYO6Q9UM54 1294 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 PCDHA1Q9Y5I3 950 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 CNTNAP4Q9C0A0 1308 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 USP42Q9H9J4 1324 aaKnown RBP9□□□□□ -0.97
CTNND1-230ENST00000532245 DKC1O60832 514 aaKnown RBP eCLIP8.99□□□□□ -0.97
CTNND1-230ENST00000532245 DNM2P50570 870 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 CALCRLQ16602 461 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 HACL1Q9UJ83 578 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 PSMA7O14818 248 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 GAS7O60861 476 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 GH2P01242 217 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 SMTNP53814 917 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 RAD51AP2Q09MP3 1159 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 ARHGAP29Q52LW3 1261 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 PRR16Q569H4 304 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 APOBEC3FQ8IUX4 373 aaKnown RBP8.99□□□□□ -0.97
CTNND1-230ENST00000532245 FANCBQ8NB91 859 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 TAF4BQ92750 862 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 GPS2Q13227 327 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 SPECC1Q5M775 1068 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 GIMAP6Q6P9H5 292 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 EEPD1Q7L9B9 569 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 APBB1IPQ7Z5R6 666 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-230ENST00000532245 OSBP2Q969R2 916 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 KRT40Q6A162 431 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 TPH2Q8IWU9 490 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 RNF169Q8NCN4 708 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 SNX29Q8TEQ0 813 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 LRWD1Q9UFC0 647 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 ATP6V0A2Q9Y487 856 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 TMEM131LA2VDJ0 1609 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
CTNND1-230ENST00000532245 ZNF521Q96K83 1311 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 N4BP3O15049 544 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 JAK2O60674 1132 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 HSPA4P34932 840 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 CETN2P41208 172 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 EP400NLQ6ZTU2 488 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 ZNF589Q86UQ0 364 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-230ENST00000532245 FOXP4Q8IVH2 680 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-230ENST00000532245 ZNF34Q8IZ26 560 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 IQUBQ8NA54 791 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 LRRC7Q96NW7 1537 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 BMP3P12645 472 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 SYT1P21579 422 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 TNNT3P45378 269 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-230ENST00000532245 DACT1Q9NYF0 836 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 ZHX1Q9UKY1 873 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-230ENST00000532245 MRVI1Q9Y6F6 885 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 MED23Q9ULK4 1368 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 ADD1P35611 737 aaKnown RBP8.98□□□□□ -0.97
CTNND1-230ENST00000532245 IGBP1P78318 339 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 STRN3Q13033 797 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 SEPT14Q6ZU15 432 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 MIER3Q7Z3K6 550 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 NBPF3Q9H094 633 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 CDK8P49336 464 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 GRPEL1Q9HAV7 217 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.971e-8■■■□□ 15.1
CTNND1-230ENST00000532245 STX17P56962 302 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 BCORL1Q5H9F3 1711 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 CCDC65Q8IXS2 484 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 RTEL1Q9NZ71 1219 aa8.98□□□□□ -0.97
CTNND1-230ENST00000532245 SCAF8Q9UPN6 1271 aaKnown RBP8.98□□□□□ -0.97
CTNND1-230ENST00000532245 YEATS4O95619 227 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 ASNSP08243 561 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 GYS1P13807 737 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 STAT2P52630 851 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 SNAP25P60880 206 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 SPAG5Q96R06 1193 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 ZNF165P49910 485 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 PLCD1P51178 756 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 FOXO4P98177 505 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 NKX1-1Q15270 411 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-230ENST00000532245 SLFNL1Q499Z3 407 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 INTS5Q6P9B9 1019 aaKnown RBP8.97□□□□□ -0.97
CTNND1-230ENST00000532245 FAM84BQ96KN1 310 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-230ENST00000532245 MXD3Q9BW11 206 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 AMNQ9BXJ7 453 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 PNMA3Q9UL41 463 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 RICTORQ6R327 1708 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 CYP2D6P10635 497 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 BIRC3Q13489 604 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 SNX21Q969T3 373 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 LLPHQ9BRT6 129 aaKnown RBP8.97□□□□□ -0.97
CTNND1-230ENST00000532245 AP5M1Q9H0R1 490 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 POTEB2H3BUK9 544 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 FAM173BQ6P4H8 233 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 DNM3Q9UQ16 869 aa8.97□□□□□ -0.97
CTNND1-230ENST00000532245 A0A1B0GVL5 298 aa8.96□□□□□ -0.97
CTNND1-230ENST00000532245 ANKRD62A6NC57 917 aa8.96□□□□□ -0.97
CTNND1-230ENST00000532245 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-230ENST00000532245 GPATCH4Q5T3I0 446 aaKnown RBP8.96□□□□□ -0.97
CTNND1-230ENST00000532245 PRAMEF18Q5VWM3 479 aa8.96□□□□□ -0.97
CTNND1-230ENST00000532245 CEP135Q66GS9 1140 aa8.96□□□□□ -0.97
CTNND1-230ENST00000532245 TBC1D5Q92609 795 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms