RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SPTLC2O15270 562 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 KINO60870 393 aaKnown RBP14.19□□□□□ -0.14
CHD7-211ENST00000532149 MMP1P03956 469 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 CALML3P27482 149 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 ME1P48163 572 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 TROAPQ12815 778 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 SLC39A14Q15043 492 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 ANO1Q5XXA6 986 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 CAMKK2Q96RR4 588 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 KAT14Q9H8E8 782 aa14.19□□□□□ -0.14
CHD7-211ENST00000532149 BAZ2AQ9UIF9 1905 aaKnown RBP14.19□□□□□ -0.14
CHD7-211ENST00000532149 C10orf71Q711Q0 1435 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 WTIPA6NIX2 430 aaPredicted RBP14.18□□□□□ -0.14
CHD7-211ENST00000532149 CMA1P23946 247 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 BTDP43251 543 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 TRAPPC10P48553 1259 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 PSEN1P49768 467 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 STRIP1Q5VSL9 837 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 SASS6Q6UVJ0 657 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 C16orf86Q6ZW13 317 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 NBPF11Q86T75 865 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 C2CD5Q86YS7 1000 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
CHD7-211ENST00000532149 USP28Q96RU2 1077 aa14.18□□□□□ -0.14
CHD7-211ENST00000532149 HOOK1Q9UJC3 728 aaKnown RBP14.18□□□□□ -0.14
CHD7-211ENST00000532149 TSPY3P0CV98 308 aa14.17□□□□□ -0.14
CHD7-211ENST00000532149 TSPY8P0CW00 308 aa14.17□□□□□ -0.14
CHD7-211ENST00000532149 SH3RF3Q8TEJ3 882 aaPredicted RBP14.17□□□□□ -0.14
CHD7-211ENST00000532149 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
CHD7-211ENST00000532149 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHD7-211ENST00000532149 DHX36Q9H2U1 1008 aaKnown RBP14.17□□□□□ -0.14
CHD7-211ENST00000532149 DACT1Q9NYF0 836 aa14.17□□□□□ -0.14
CHD7-211ENST00000532149 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
CHD7-211ENST00000532149 NAV1Q8NEY1 1877 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 FAM237AA0A1B0GTK4 181 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 hCG_1984214I3L0E3 225 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 CUTAO60888 179 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 TPM3P06753 285 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 TFAP4Q01664 338 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 TMTC3Q6ZXV5 915 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 CCAR1Q8IX12 1150 aaKnown RBP14.16□□□□□ -0.14
CHD7-211ENST00000532149 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 ZNF713Q8N859 430 aaPredicted RBP14.16□□□□□ -0.14
CHD7-211ENST00000532149 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 CCDC12Q8WUD4 166 aaPredicted RBP14.16□□□□□ -0.14
CHD7-211ENST00000532149 TGFBRAP1Q8WUH2 860 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 NUP133Q8WUM0 1156 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 PDLIM2Q96JY6 352 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
CHD7-211ENST00000532149 RBSNQ9H1K0 784 aa14.16□□□□□ -0.14
CHD7-211ENST00000532149 PLIN4Q96Q06 1357 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 NOVP48745 357 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 RHBDL3P58872 404 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 GTF2IP78347 998 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 ZRSR1Q15695 479 aaKnown RBP14.15□□□□□ -0.14
CHD7-211ENST00000532149 KANK3Q6NY19 840 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 FAM200AQ8TCP9 573 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 FBXO41Q8TF61 875 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 ZNF622Q969S3 477 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHD7-211ENST00000532149 CCDC17Q96LX7 622 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 FUCA2Q9BTY2 467 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 EHD4Q9H223 541 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
CHD7-211ENST00000532149 HLA-DOAP06340 250 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 KRT2P35908 639 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
CHD7-211ENST00000532149 TEX2Q8IWB9 1127 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 PHKBQ93100 1093 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 ZDHHC15Q96MV8 337 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 ZKSCAN3Q9BRR0 538 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 INCENPQ9NQS7 918 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 SERPINA10Q9UK55 444 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 PCDHA7Q9UN72 937 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 FLT1P17948 1338 aa14.14□□□□□ -0.15
CHD7-211ENST00000532149 MYH6P13533 1939 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 USP17L8P0C7I0 530 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 TOP1P11387 765 aaKnown RBP14.13□□□□□ -0.15
CHD7-211ENST00000532149 LIG1P18858 919 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 FUT2Q10981 343 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
CHD7-211ENST00000532149 GRM4Q14833 912 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 DIXDC1Q155Q3 683 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 DIS3L2Q8IYB7 885 aaKnown RBP14.13□□□□□ -0.15
CHD7-211ENST00000532149 PNMA1Q8ND90 353 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 ENGASEQ8NFI3 743 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 PHF20Q9BVI0 1012 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 SENP2Q9HC62 589 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms